Literature DB >> 20974243

OMiR: Identification of associations between OMIM diseases and microRNAs.

Simona Rossi1, Aristotelis Tsirigos, Antonio Amoroso, Nicoletta Mascellani, Isidore Rigoutsos, George A Calin, Stefano Volinia.   

Abstract

A large number of loci for genetic diseases have been mapped on the human genome and a group of hereditary diseases among them have thus far proven unsuccessful to clone. It is conceivable that such "unclonable" diseases are not linked to abnormalities of protein coding genes (PCGs), but of non-coding RNAs (ncRNAs). We developed a novel approach termed OMiR (OMIM and miRNAs), to test whether microRNAs (miRNAs) exhibit any associations with mapped genetic diseases not yet associated with a PCG. We found that "orphan" genetic disease loci were proximal to miRNA loci more frequently than to loci for which the responsible protein coding gene is known, thus suggesting that miRNAs might be the elusive culprits. Our findings indicate that inclusion of miRNAs among the candidate genes to be considered could assist geneticists in their hunt for disease genes, particularly in the case of rare diseases.
Copyright © 2010 Elsevier Inc. All rights reserved.

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Year:  2010        PMID: 20974243     DOI: 10.1016/j.ygeno.2010.10.004

Source DB:  PubMed          Journal:  Genomics        ISSN: 0888-7543            Impact factor:   5.736


  8 in total

1.  Comparative MiRNA Expressional Profiles and Molecular Networks in Human Small Bowel Tissues of Necrotizing Enterocolitis and Spontaneous Intestinal Perforation.

Authors:  Pak Cheung Ng; Kathy Yuen Yee Chan; Kam Tong Leung; Yuk Him Tam; Terence Ping Yuen Ma; Hugh Simon Lam; Hon Ming Cheung; Kim Hung Lee; Ka Fai To; Karen Li
Journal:  PLoS One       Date:  2015-08-14       Impact factor: 3.240

2.  DISMIRA: Prioritization of disease candidates in miRNA-disease associations based on maximum weighted matching inference model and motif-based analysis.

Authors:  Joseph J Nalluri; Bhanu K Kamapantula; Debmalya Barh; Neha Jain; Antaripa Bhattacharya; Sintia Silva de Almeida; Rommel Thiago Juca Ramos; Artur Silva; Vasco Azevedo; Preetam Ghosh
Journal:  BMC Genomics       Date:  2015-05-26       Impact factor: 3.969

3.  Identification of microRNA-mRNA interactions in atrial fibrillation using microarray expression profiles and bioinformatics analysis.

Authors:  Tao Wang; Bin Wang
Journal:  Mol Med Rep       Date:  2016-04-12       Impact factor: 2.952

4.  A novel information diffusion method based on network consistency for identifying disease related microRNAs.

Authors:  Min Chen; Yan Peng; Ang Li; Zejun Li; Yingwei Deng; Wenhua Liu; Bo Liao; Chengqiu Dai
Journal:  RSC Adv       Date:  2018-10-30       Impact factor: 3.361

5.  Prediction of associations between OMIM diseases and microRNAs by random walk on OMIM disease similarity network.

Authors:  Hailin Chen; Zuping Zhang
Journal:  ScientificWorldJournal       Date:  2013-03-20

6.  Protein-driven inference of miRNA-disease associations.

Authors:  Søren Mørk; Sune Pletscher-Frankild; Albert Palleja Caro; Jan Gorodkin; Lars Juhl Jensen
Journal:  Bioinformatics       Date:  2013-11-21       Impact factor: 6.937

7.  Determining Associations between Human Diseases and non-coding RNAs with Critical Roles in Network Control.

Authors:  Haruna Kagami; Tatsuya Akutsu; Shingo Maegawa; Hiroshi Hosokawa; Jose C Nacher
Journal:  Sci Rep       Date:  2015-10-13       Impact factor: 4.379

8.  Global Similarity Method Based on a Two-tier Random Walk for the Prediction of microRNA-Disease Association.

Authors:  Min Chen; Bo Liao; Zejun Li
Journal:  Sci Rep       Date:  2018-04-24       Impact factor: 4.379

  8 in total

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