Literature DB >> 20971469

Design, optimization and evaluation of specific affinity adsorbent for oligopeptides.

Yitao Qiao1, Pinglin Li, Yingchao Chen, Jing Feng, Jun Wang, Wei Wang, Yi Ma, Pingchuan Sun, Zhi Yuan.   

Abstract

A major challenge in the development of affinity adsorbents is the design of specific adsorbents for target molecules. In this paper, a two-step strategy was used to design a specific adsorbent for oligopeptides. Based on the structural characteristics of target peptide DFLAE (DE5), the affinity ligand CDenHis bearing hydrophobic inclusion and electrostatic interaction sites was prepared by grafting histidine onto β-cyclodextrin (CD) using ethylenediamine; ligands with single hydrophobic inclusion or electrostatic interaction sites (CDen and HisOMe) were used as reference ligands. Results indicated that the binding affinity (K(a)) of CDenHis with DE5 was 6.23×10(4)M(-1), 23- and 61-fold higher than that of CDen and HisOMe, respectively. Computer simulations were used to further optimize the steric configuration of CDenHis. It was found that the optimized ligand CDdnHis exhibited a much improved binding affinity for DE5 (K(a)=1.02×10(5)M(-1)). Moreover, the corresponding adsorbent A-CDdnHis not only showed much better adsorption ability compared with A-CDenHis, but also excellent adsorption specificity for DE5-containing peptides. Kinetic analysis and adsorption mechanism studies suggested that the configuration matching of CDdnHis with DE5 and the cooperation of multiple interactions led to the fast and selective adsorption of DE5-containing peptides to A-CDdnHis.
Copyright © 2010 Elsevier B.V. All rights reserved.

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Year:  2010        PMID: 20971469     DOI: 10.1016/j.chroma.2010.10.007

Source DB:  PubMed          Journal:  J Chromatogr A        ISSN: 0021-9673            Impact factor:   4.759


  1 in total

1.  Combined docking, molecular dynamics simulations and spectroscopic studies for the rational design of a dipeptide ligand for affinity chromatography separation of human serum albumin.

Authors:  Elham Aghaee; Jahan B Ghasemi; Firouzeh Manouchehri; Saeed Balalaie
Journal:  J Mol Model       Date:  2014-09-16       Impact factor: 1.810

  1 in total

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