Literature DB >> 20971211

8-Oxoguanine DNA-glycosylase repair activity and expression: a comparison between cryopreserved isolated lymphocytes and EBV-derived lymphoblastoid cell lines.

Filomena Mazzei1, Simonetta Guarrera, Alessandra Allione, Valeria Simonelli, Laura Narciso, Flavia Barone, Anna Minoprio, Fulvio Ricceri, Ada Funaro, Mariarosaria D'Errico, Ulla Vogel, Giuseppe Matullo, Eugenia Dogliotti.   

Abstract

Several lines of evidence suggest an association between oxidative DNA-damage repair capacity and cancer risk. In particular, a DNA-glycosylase assay for removal of 8-oxoguanine (8-oxoG) in peripheral blood mononuclear cells (PBMC) has been successfully applied to identify populations with increased risk for lung cancer and squamous cell carcinomas of head and neck. In order to verify whether EBV-transformed lymphoblastoid cell lines (LCL) are a suitable surrogate for PBMC in specific DNA-repair phenotypic assays, a validation trial was conducted. PBMC from 20 healthy subjects were collected and an aliquot was transformed with EBV to obtain LCL. The ability of cell-free extracts from both cell types to incise a 3'-fluorescently labelled duplex oligonucleotide containing a single 8-oxoG (OGG assay) was evaluated. Since this activity is mediated predominantly by OGG1, the OGG1 gene expression was also measured. 8-oxoG DNA-glycosylase activity and OGG1 expression were significantly higher (p<0.0001) in LCL than in PBMC. However, while this assay was shown to be robust and reproducible when used on PBMC (intra-assay CV=8%), a high intra-culture variability was observed with LCL (intra-culture CV=16.8%). Neither differences on OGG1 gene expression nor the cell-cycle distribution seemed to account for this variability. Inter-individual variability of OGG activity in PBMC and LCL was not associated with OGG1 gene expression. We have therefore established a non-radioactive cleavage assay that can be easily applied to measure OGG activity in human PBMC. The use of LCL for DNA-repair genotype-phenotype correlation studies seems to be inappropriate, at least with cell-free based functional assays. 2010 Elsevier B.V. All rights reserved.

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Year:  2010        PMID: 20971211     DOI: 10.1016/j.mrgentox.2010.10.004

Source DB:  PubMed          Journal:  Mutat Res        ISSN: 0027-5107            Impact factor:   2.433


  10 in total

Review 1.  Variation in base excision repair capacity.

Authors:  David M Wilson; Daemyung Kim; Brian R Berquist; Alice J Sigurdson
Journal:  Mutat Res       Date:  2010-12-15       Impact factor: 2.433

Review 2.  DNA repair: from genome maintenance to biomarker and therapeutic target.

Authors:  Shadia Jalal; Jennifer N Earley; John J Turchi
Journal:  Clin Cancer Res       Date:  2011-09-09       Impact factor: 12.531

3.  DNA methylation of oxidative stress genes and cancer risk in the Normative Aging Study.

Authors:  Tao Gao; Brian Thomas Joyce; Lei Liu; Yinan Zheng; Qi Dai; Zhou Zhang; Wei Zhang; Martha J Shrubsole; Meng-Hua Tao; Joel Schwartz; Andrea Baccarelli; Lifang Hou
Journal:  Am J Cancer Res       Date:  2016-01-15       Impact factor: 6.166

4.  Polymorphisms in the XRCC1 gene modify survival of bladder cancer patients treated with chemotherapy.

Authors:  Carlotta Sacerdote; Simonetta Guarrera; Fulvio Ricceri; Barbara Pardini; Silvia Polidoro; Alessandra Allione; Rossana Critelli; Alessia Russo; Angeline S Andrew; Yuanqing Ye; Xifeng Wu; Lambertus A Kiemeney; Andrea Bosio; Giovanni Casetta; Giuseppina Cucchiarale; Paolo Destefanis; Paolo Gontero; Luigi Rolle; Andrea Zitella; Dario Fontana; Paolo Vineis; Giuseppe Matullo
Journal:  Int J Cancer       Date:  2013-04-25       Impact factor: 7.396

Review 5.  Mitochondria in lung diseases.

Authors:  Bharathi Aravamudan; Michael A Thompson; Christina M Pabelick; Y S Prakash
Journal:  Expert Rev Respir Med       Date:  2013-08-27       Impact factor: 3.772

6.  In depth comparison of an individual's DNA and its lymphoblastoid cell line using whole genome sequencing.

Authors:  Dorothee Nickles; Lohith Madireddy; Shan Yang; Pouya Khankhanian; Steve Lincoln; Stephen L Hauser; Jorge R Oksenberg; Sergio E Baranzini
Journal:  BMC Genomics       Date:  2012-09-14       Impact factor: 3.969

7.  Autologous hematopoietic stem cell transplantation in lymphoma patients is associated with a decrease in the double strand break repair capacity of peripheral blood lymphocytes.

Authors:  Sandrine Lacoste; Smita Bhatia; Yanjun Chen; Ravi Bhatia; Timothy R O'Connor
Journal:  PLoS One       Date:  2017-02-16       Impact factor: 3.240

8.  Extensive epigenetic and transcriptomic variability between genetically identical human B-lymphoblastoid cells with implications in pharmacogenomics research.

Authors:  Lilla Ozgyin; Attila Horvath; Zsuzsanna Hevessy; Balint L Balint
Journal:  Sci Rep       Date:  2019-03-20       Impact factor: 4.379

Review 9.  Lymphoblastoid Cell lines: a Continuous in Vitro Source of Cells to Study Carcinogen Sensitivity and DNA Repair.

Authors:  Tabish Hussain; Rita Mulherkar
Journal:  Int J Mol Cell Med       Date:  2012

10.  In vitro dexamethasone treatment does not induce alternative ATM transcripts in cells from Ataxia-Telangiectasia patients.

Authors:  Elisa Pozzi; Elisa Giorgio; Cecilia Mancini; Nicola Lo Buono; Stefania Augeri; Marta Ferrero; Eleonora Di Gregorio; Evelise Riberi; Maria Vinciguerra; Lorenzo Nanetti; Federico Tommaso Bianchi; Maria Paola Sassi; Vincenzo Costanzo; Caterina Mariotti; Ada Funaro; Simona Cavalieri; Alfredo Brusco
Journal:  Sci Rep       Date:  2020-11-19       Impact factor: 4.379

  10 in total

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