Literature DB >> 20970496

Epigenetics and autosomal dominant polycystic kidney disease.

Xiaogang Li1.   

Abstract

The roles of epigenetic modulation of gene expression and protein functions in autosomal dominant polycystic kidney disease (ADPKD) have recently become the focus of scientific investigation. Evidence generated to date indicates that one of the epigenetic modifiers, histone deacetylases (HDACs), are important regulators of ADPKD. HDACs are involved in regulating the expression of the Pkd1 gene and are the target of fluid flow-induced calcium signal in kidney epithelial cells. Pharmacological inhibition of HDAC activity has been found to reduce the progression of cyst formation and slow the decline of kidney function in Pkd1 conditional knockout mice and Pkd2 knockout mice, respectively, implicating the potential clinical application of HDAC inhibitors on ADPKD. Since the expression of HDAC6 is upregulated in cystic epithelial cells, the potential roles of HDAC6 in regulating cilia resorption and epidermal growth factor receptor (EGFR) trafficking through deacetylating α-tubulin and regulating Wnt signaling through deacetylating β-catenin are also discussed. This article is part of a Special Issue entitled: Polycystic Kidney Disease.
Copyright © 2010 Elsevier B.V. All rights reserved.

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Year:  2010        PMID: 20970496      PMCID: PMC3413450          DOI: 10.1016/j.bbadis.2010.10.008

Source DB:  PubMed          Journal:  Biochim Biophys Acta        ISSN: 0006-3002


  80 in total

1.  HDAC6 is a microtubule-associated deacetylase.

Authors:  Charlotte Hubbert; Amaris Guardiola; Rong Shao; Yoshiharu Kawaguchi; Akihiro Ito; Andrew Nixon; Minoru Yoshida; Xiao-Fan Wang; Tso-Pang Yao
Journal:  Nature       Date:  2002-05-23       Impact factor: 49.962

Review 2.  Structure and dynamic behavior of nucleosomes.

Authors:  Karolin Luger
Journal:  Curr Opin Genet Dev       Date:  2003-04       Impact factor: 5.578

3.  Regulation and destabilization of HIF-1alpha by ARD1-mediated acetylation.

Authors:  Joo Won Jeong; Moon Kyoung Bae; Mee Young Ahn; Se Hee Kim; Tae Kwon Sohn; Myung Ho Bae; Mi Ae Yoo; Eun Joo Song; Kong Joo Lee; Kyu Won Kim
Journal:  Cell       Date:  2002-11-27       Impact factor: 41.582

4.  Axin-mediated CKI phosphorylation of beta-catenin at Ser 45: a molecular switch for the Wnt pathway.

Authors:  Sharon Amit; Ada Hatzubai; Yaara Birman; Jens S Andersen; Etti Ben-Shushan; Matthias Mann; Yinon Ben-Neriah; Irit Alkalay
Journal:  Genes Dev       Date:  2002-05-01       Impact factor: 11.361

5.  Polycystin-dependent fluid flow sensing targets histone deacetylase 5 to prevent the development of renal cysts.

Authors:  Sheng Xia; Xiaogang Li; Teri Johnson; Chris Seidel; Darren P Wallace; Rong Li
Journal:  Development       Date:  2010-02-24       Impact factor: 6.868

6.  MDM2-HDAC1-mediated deacetylation of p53 is required for its degradation.

Authors:  Akihiro Ito; Yoshiharu Kawaguchi; Chun-Hsiang Lai; Jeffrey J Kovacs; Yuichiro Higashimoto; Ettore Appella; Tso-Pang Yao
Journal:  EMBO J       Date:  2002-11-15       Impact factor: 11.598

7.  Cloning and functional characterization of HDAC11, a novel member of the human histone deacetylase family.

Authors:  Lin Gao; Maria A Cueto; Fred Asselbergs; Peter Atadja
Journal:  J Biol Chem       Date:  2002-04-10       Impact factor: 5.157

Review 8.  Histone acetylation/deacetylation and cancer: an "open" and "shut" case?

Authors:  S G Gray; B T Teh
Journal:  Curr Mol Med       Date:  2001-09       Impact factor: 2.222

9.  Acetylated sp3 is a transcriptional activator.

Authors:  Sudhakar Ammanamanchi; James W Freeman; Michael G Brattain
Journal:  J Biol Chem       Date:  2003-06-30       Impact factor: 5.157

Review 10.  Histone deacetylases: unique players in shaping the epigenetic histone code.

Authors:  Sam Thiagalingam; Kuang-Hung Cheng; Hyunjoo J Lee; Nora Mineva; Arunthathi Thiagalingam; Jose F Ponte
Journal:  Ann N Y Acad Sci       Date:  2003-03       Impact factor: 5.691

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  18 in total

1.  Therapeutic targeting of BET bromodomain protein, Brd4, delays cyst growth in ADPKD.

Authors:  Xia Zhou; Lucy X Fan; Dorien J M Peters; Marie Trudel; James E Bradner; Xiaogang Li
Journal:  Hum Mol Genet       Date:  2015-04-15       Impact factor: 6.150

2.  Genome-wide methylation profiling of ADPKD identified epigenetically regulated genes associated with renal cyst development.

Authors:  Yu Mi Woo; Jae-Bum Bae; Yeon-Hee Oh; Young-Gun Lee; Min Joo Lee; Eun Young Park; Jung-Kyoon Choi; Sunyoung Lee; Yubin Shin; Jaemyun Lyu; Hye-Yoon Jung; Yeon-Su Lee; Young-Hwan Hwang; Young-Joon Kim; Jong Hoon Park
Journal:  Hum Genet       Date:  2013-10-16       Impact factor: 4.132

3.  Lysine methyltransferase SMYD2 promotes cyst growth in autosomal dominant polycystic kidney disease.

Authors:  Linda Xiaoyan Li; Lucy X Fan; Julie Xia Zhou; Jared J Grantham; James P Calvet; Julien Sage; Xiaogang Li
Journal:  J Clin Invest       Date:  2017-06-12       Impact factor: 14.808

Review 4.  Chromatin Methylation Abnormalities in Autosomal Dominant Polycystic Kidney Disease.

Authors:  Jing Xu; Cheng Xue; Xiaodong Wang; Lei Zhang; Changlin Mei; Zhiguo Mao
Journal:  Front Med (Lausanne)       Date:  2022-07-05

Review 5.  Molecular Mechanisms of Epigenetic Regulation, Inflammation, and Cell Death in ADPKD.

Authors:  Ewud Agborbesong; Linda Xiaoyan Li; Lu Li; Xiaogang Li
Journal:  Front Mol Biosci       Date:  2022-06-29

Review 6.  New treatments for autosomal dominant polycystic kidney disease.

Authors:  Ming-Yang Chang; Albert C M Ong
Journal:  Br J Clin Pharmacol       Date:  2013-10       Impact factor: 4.335

7.  Sirtuin 1 inhibition delays cyst formation in autosomal-dominant polycystic kidney disease.

Authors:  Xia Zhou; Lucy X Fan; William E Sweeney; John M Denu; Ellis D Avner; Xiaogang Li
Journal:  J Clin Invest       Date:  2013-06-17       Impact factor: 14.808

8.  Severe Polycystic Liver Disease Is Not Caused by Large Deletions of the PRKCSH Gene.

Authors:  Wybrich R Cnossen; Jake S F Maurits; Jody Salomon; René H M Te Morsche; Esmé Waanders; Joost P H Drenth
Journal:  J Clin Lab Anal       Date:  2015-09-13       Impact factor: 2.352

Review 9.  Experimental therapies and ongoing clinical trials to slow down progression of ADPKD.

Authors:  Maria V Irazabal; Vicente E Torres
Journal:  Curr Hypertens Rev       Date:  2013-02

10.  HDAC6 regulates epidermal growth factor receptor (EGFR) endocytic trafficking and degradation in renal epithelial cells.

Authors:  Wei Liu; Lucy X Fan; Xia Zhou; William E Sweeney; Ellis D Avner; Xiaogang Li
Journal:  PLoS One       Date:  2012-11-13       Impact factor: 3.240

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