Literature DB >> 20967617

Ribosome display: a technology for selecting and evolving proteins from large libraries.

Birgit Dreier1, Andreas Plückthun.   

Abstract

The selection and concomitant affinity maturation of proteins to bind to user-defined target molecules have become a key technology in biochemical research, diagnostics, and therapy. One of the most potent selection technologies for such applications is ribosome display. It works entirely in vitro, and this has two important consequences. First, since no transformation of any cells is required, libraries with much greater diversity can be handled than with most other techniques. Second, since a library does not have to be cloned and transformed, it is very convenient to introduce random errors in the library by PCR-based methods and select improved binders. Thus, a true directed evolution, an iteration between randomization and selection over several generations, can be conveniently carried out, e.g., for affinity maturation. Ribosome display has been used successfully for the selection of antibody fragments and other binding proteins, such as Designed Ankyrin Repeat Proteins (DARPins).

Mesh:

Substances:

Year:  2011        PMID: 20967617     DOI: 10.1007/978-1-60761-944-4_21

Source DB:  PubMed          Journal:  Methods Mol Biol        ISSN: 1064-3745


  20 in total

Review 1.  Nanomedicines based on recombinant fusion proteins for targeting therapeutic siRNA oligonucleotides.

Authors:  Johannes Winkler
Journal:  Ther Deliv       Date:  2011-07

2.  Conformation-dependent recognition of HIV gp120 by designed ankyrin repeat proteins provides access to novel HIV entry inhibitors.

Authors:  Axel Mann; Nikolas Friedrich; Anders Krarup; Jacqueline Weber; Emanuel Stiegeler; Birgit Dreier; Pavel Pugach; Melissa Robbiani; Tina Riedel; Kerstin Moehle; John A Robinson; Peter Rusert; Andreas Plückthun; Alexandra Trkola
Journal:  J Virol       Date:  2013-03-13       Impact factor: 5.103

3.  Her2-specific multivalent adapters confer designed tropism to adenovirus for gene targeting.

Authors:  Birgit Dreier; Galina Mikheeva; Natalya Belousova; Petra Parizek; Edgar Boczek; Ilian Jelesarov; Patrik Forrer; Andreas Plückthun; Victor Krasnykh
Journal:  J Mol Biol       Date:  2010-11-05       Impact factor: 5.469

Review 4.  Beyond Antibodies as Binding Partners: The Role of Antibody Mimetics in Bioanalysis.

Authors:  Xiaowen Yu; Yu-Ping Yang; Emre Dikici; Sapna K Deo; Sylvia Daunert
Journal:  Annu Rev Anal Chem (Palo Alto Calif)       Date:  2017-03-24       Impact factor: 10.745

5.  Evidence for context-dependent complementarity of non-Shine-Dalgarno ribosome binding sites to Escherichia coli rRNA.

Authors:  Pamela A Barendt; Najaf A Shah; Gregory A Barendt; Parth A Kothari; Casim A Sarkar
Journal:  ACS Chem Biol       Date:  2013-03-07       Impact factor: 5.100

6.  Structural and functional analysis of phosphorylation-specific binders of the kinase ERK from designed ankyrin repeat protein libraries.

Authors:  Lutz Kummer; Petra Parizek; Peter Rube; Bastian Millgramm; Anke Prinz; Peer R E Mittl; Melanie Kaufholz; Bastian Zimmermann; Friedrich W Herberg; Andreas Plückthun
Journal:  Proc Natl Acad Sci U S A       Date:  2012-07-27       Impact factor: 11.205

7.  Streamlined protocol for mRNA display.

Authors:  Pamela A Barendt; Daphne T W Ng; Casey N McQuade; Casim A Sarkar
Journal:  ACS Comb Sci       Date:  2013-01-25       Impact factor: 3.784

8.  Broad-specificity mRNA-rRNA complementarity in efficient protein translation.

Authors:  Pamela A Barendt; Najaf A Shah; Gregory A Barendt; Casim A Sarkar
Journal:  PLoS Genet       Date:  2012-03-22       Impact factor: 5.917

9.  Protein interference applications in cellular and developmental biology using DARPins that recognize GFP and mCherry.

Authors:  Michael Brauchle; Simon Hansen; Emmanuel Caussinus; Anna Lenard; Amanda Ochoa-Espinosa; Oliver Scholz; Simon G Sprecher; Andreas Plückthun; Markus Affolter
Journal:  Biol Open       Date:  2014-11-21       Impact factor: 2.422

10.  In vitro Fab display: a cell-free system for IgG discovery.

Authors:  Ryan L Stafford; Marissa L Matsumoto; Gang Yin; Qi Cai; Juan Jose Fung; Heather Stephenson; Avinash Gill; Monica You; Shwu-Hwa Lin; Willie D Wang; Mary Rose Masikat; Xiaofan Li; Kalyani Penta; Alex R Steiner; Ramesh Baliga; Christopher J Murray; Christopher D Thanos; Trevor J Hallam; Aaron K Sato
Journal:  Protein Eng Des Sel       Date:  2014-02-28       Impact factor: 1.650

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