Literature DB >> 20964622

Matrix dimensions bias demographic inferences: implications for comparative plant demography.

Roberto Salguero-Gómez1, Joshua B Plotkin.   

Abstract

While the wealth of projection matrices in plant demography permits comparative studies, variation in matrix dimensions complicates interspecific comparisons. Collapsing matrices to a common dimension may facilitate such comparisons but may also bias the inferred demographic parameters. Here we examine how matrix dimension affects inferred demographic elasticities and how different collapsing criteria perform. We analyzed 13 x 13 matrices representing nine plant species, collapsing these matrices (i) into even 7 x 7, 5 x 5, 4 x 4, and 3 x 3 matrices and (ii) into 5 x 5 matrices using different criteria. Stasis and fecundity elasticities increased when matrix dimension was reduced, whereas those of progression and retrogression decreased. We suggest a collapsing criterion that minimizes dissimilarities between the original- and collapsed-matrix elasticities and apply it to 66 plant species to study how life span and growth form influence the relationship between matrix dimension and elasticities. Our analysis demonstrates that (i) projection matrix dimension has significant effects on inferred demographic parameters, (ii) there are better-performing methods than previously suggested for standardizing matrix dimension, and (iii) herbaceous perennial projection matrices are particularly sensitive to changes in matrix dimensionality. For comparative demographic studies, we recommend normalizing matrices to a common dimension by collapsing higher classes and leaving the first few classes unaltered.

Mesh:

Year:  2010        PMID: 20964622     DOI: 10.1086/657044

Source DB:  PubMed          Journal:  Am Nat        ISSN: 0003-0147            Impact factor:   3.926


  11 in total

1.  Fast-slow continuum and reproductive strategies structure plant life-history variation worldwide.

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Journal:  Proc Natl Acad Sci U S A       Date:  2015-12-22       Impact factor: 11.205

2.  Functional traits explain variation in plant life history strategies.

Authors:  Peter B Adler; Roberto Salguero-Gómez; Aldo Compagnoni; Joanna S Hsu; Jayanti Ray-Mukherjee; Cyril Mbeau-Ache; Miguel Franco
Journal:  Proc Natl Acad Sci U S A       Date:  2013-12-30       Impact factor: 11.205

3.  Native insect herbivory limits population growth rate of a non-native thistle.

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Journal:  Oecologia       Date:  2014-01-09       Impact factor: 3.225

4.  A demographic approach to study effects of climate change in desert plants.

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Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2012-11-19       Impact factor: 6.237

5.  Matrix models for size-structured populations: unrealistic fast growth or simply diffusion?

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Journal:  PLoS One       Date:  2014-06-06       Impact factor: 3.240

6.  Constructing stage-structured matrix population models from life tables: comparison of methods.

Authors:  Masami Fujiwara; Jasmin Diaz-Lopez
Journal:  PeerJ       Date:  2017-10-26       Impact factor: 2.984

7.  Less favourable climates constrain demographic strategies in plants.

Authors:  Anna M Csergő; Roberto Salguero-Gómez; Olivier Broennimann; Shaun R Coutts; Antoine Guisan; Amy L Angert; Erik Welk; Iain Stott; Brian J Enquist; Brian McGill; Jens-Christian Svenning; Cyrille Violle; Yvonne M Buckley
Journal:  Ecol Lett       Date:  2017-06-13       Impact factor: 9.492

8.  Optimal immune specificity at the intersection of host life history and parasite epidemiology.

Authors:  Alexander E Downie; Andreas Mayer; C Jessica E Metcalf; Andrea L Graham
Journal:  PLoS Comput Biol       Date:  2021-12-21       Impact factor: 4.475

9.  Tree cover bimodality in savannas and forests emerging from the switching between two fire dynamics.

Authors:  Carlo De Michele; Francesco Accatino
Journal:  PLoS One       Date:  2014-03-24       Impact factor: 3.240

10.  Population Viability and Vital Rate Sensitivity of an Endangered Avian Cooperative Breeder, the White-Breasted Thrasher (Ramphocinclus brachyurus).

Authors:  Jennifer L Mortensen; J Michael Reed
Journal:  PLoS One       Date:  2016-02-09       Impact factor: 3.752

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