Literature DB >> 20964411

Microfluidic glycosyl hydrolase screening for biomass-to-biofuel conversion.

Rajiv Bharadwaj1, Zhiwei Chen, Supratim Datta, Bradley M Holmes, Rajat Sapra, Blake A Simmons, Paul D Adams, Anup K Singh.   

Abstract

The hydrolysis of biomass to fermentable sugars using glycosyl hydrolases such as cellulases and hemicellulases is a limiting and costly step in the conversion of biomass to biofuels. Enhancement in hydrolysis efficiency is necessary and requires improvement in both enzymes and processing strategies. Advances in both areas in turn strongly depend on the progress in developing high-throughput assays to rapidly and quantitatively screen a large number of enzymes and processing conditions. For example, the characterization of various cellodextrins and xylooligomers produced during the time course of saccharification is important in the design of suitable reactors, enzyme cocktail compositions, and biomass pretreatment schemes. We have developed a microfluidic-chip-based assay for rapid and precise characterization of glycans and xylans resulting from biomass hydrolysis. The technique enables multiplexed separation of soluble cellodextrins and xylose oligomers in around 1 min (10-fold faster than HPLC). The microfluidic device was used to elucidate the mode of action of Tm_Cel5A, a novel cellulase from hyperthermophile Thermotoga maritima . The results demonstrate that the cellulase is active at 80 °C and effectively hydrolyzes cellodextrins and ionic-liquid-pretreated switchgrass and Avicel to glucose, cellobiose, and cellotriose. The proposed microscale approach is ideal for quantitative large-scale screening of enzyme libraries for biomass hydrolysis, for development of energy feedstocks, and for polysaccharide sequencing.

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Year:  2010        PMID: 20964411     DOI: 10.1021/ac102243f

Source DB:  PubMed          Journal:  Anal Chem        ISSN: 0003-2700            Impact factor:   6.986


  6 in total

1.  Engineering of a highly thermostable endoglucanase from the GH7 family of Bipolaris sorokiniana for higher catalytic efficiency.

Authors:  Shritama Aich; Supratim Datta
Journal:  Appl Microbiol Biotechnol       Date:  2020-03-10       Impact factor: 4.813

Review 2.  Microfluidic technologies for synthetic biology.

Authors:  Parisutham Vinuselvi; Seongyong Park; Minseok Kim; Jung Min Park; Taesung Kim; Sung Kuk Lee
Journal:  Int J Mol Sci       Date:  2011-06-03       Impact factor: 5.923

3.  Understanding the structure and composition of recalcitrant oligosaccharides in hydrolysate using high-throughput biotin-based glycome profiling and mass spectrometry.

Authors:  Saisi Xue; Sivakumar Pattathil; Leonardo da Costa Sousa; Bryan Ubanwa; Bruce Dale; A Daniel Jones; Venkatesh Balan
Journal:  Sci Rep       Date:  2022-02-15       Impact factor: 4.996

4.  Development and application of a high throughput carbohydrate profiling technique for analyzing plant cell wall polysaccharides and carbohydrate active enzymes.

Authors:  Xiaofei Li; Peter Jackson; Denis V Rubtsov; Nuno Faria-Blanc; Jenny C Mortimer; Simon R Turner; Kristian B Krogh; Katja S Johansen; Paul Dupree
Journal:  Biotechnol Biofuels       Date:  2013-07-03       Impact factor: 6.040

5.  Improved activity of a thermophilic cellulase, Cel5A, from Thermotoga maritima on ionic liquid pretreated switchgrass.

Authors:  Zhiwei Chen; Jose H Pereira; Hanbin Liu; Huu M Tran; Nathan S Y Hsu; Dean Dibble; Seema Singh; Paul D Adams; Rajat Sapra; Masood Z Hadi; Blake A Simmons; Kenneth L Sale
Journal:  PLoS One       Date:  2013-11-14       Impact factor: 3.240

6.  Sugar loss and enzyme inhibition due to oligosaccharide accumulation during high solids-loading enzymatic hydrolysis.

Authors:  Saisi Xue; Nirmal Uppugundla; Michael J Bowman; David Cavalier; Leonardo Da Costa Sousa; Bruce E Dale; Venkatesh Balan
Journal:  Biotechnol Biofuels       Date:  2015-11-26       Impact factor: 6.040

  6 in total

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