Literature DB >> 20960584

Delineation of substrate selection and anaplerosis in tricarboxylic acid cycle of the heart by 13C NMR spectroscopy and mass spectrometry.

Wei Li1, Fang Bian, Priyanjana Chaudhuri, Xian Mao, Henri Brunengraber, Xin Yu.   

Abstract

(13)C NMR and mass spectrometry (MS) provide complementary information regarding the (13)C labeling of intermediary metabolites. Currently, these two techniques are rarely used together because of the complexity of modeling the distribution of both positional and mass isotopomers. In this study, we developed a matrix-based model for the assessment of (13)C label distribution in the tricarboxylic acid cycle and related metabolites. The model was applied to the analysis of NMR- and MS-measured (13)C isotopomers for quantification of substrate utilization and anaplerotic fluxes in isolated perfused rat hearts. NMR and MS data were acquired from two groups of rat hearts perfused with substrates in complementary labeling patterns, i.e. the (13)C-PAL + GLC group (0.6 mM [(13) C(16) ]palmitate + 5.5 mM glucose) and the PAL + (13)C-GLC group (0.6 mM palmitate + 5.5 mM [(13)C(6) ]glucose). Relative flux parameters were obtained by fitting the model to the NMR data, MS data and their combination, respectively. Our results suggest that, although both NMR and MS can provide accurate quantification of substrate selection in oxidative metabolism, the accuracy of estimation of anaplerotic fluxes relies on the combination of these two experimental methods.
Copyright © 2010 John Wiley & Sons, Ltd.

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Year:  2010        PMID: 20960584      PMCID: PMC3086566          DOI: 10.1002/nbm.1569

Source DB:  PubMed          Journal:  NMR Biomed        ISSN: 0952-3480            Impact factor:   4.044


  22 in total

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Authors:  W Wiechert; M Möllney; N Isermann; M Wurzel; A A de Graaf
Journal:  Biotechnol Bioeng       Date:  1999       Impact factor: 4.530

2.  Metabolite and isotopomer balancing in the analysis of metabolic cycles: I. Theory.

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Journal:  Biotechnol Bioeng       Date:  1999-02       Impact factor: 4.530

3.  Elementary metabolite units (EMU): a novel framework for modeling isotopic distributions.

Authors:  Maciek R Antoniewicz; Joanne K Kelleher; Gregory Stephanopoulos
Journal:  Metab Eng       Date:  2006-09-17       Impact factor: 9.783

4.  Modeling isotopomer distributions in biochemical networks using isotopomer mapping matrices.

Authors:  K Schmidt; M Carlsen; J Nielsen; J Villadsen
Journal:  Biotechnol Bioeng       Date:  1997-09-20       Impact factor: 4.530

5.  13C isotopomer analysis of glutamate by tandem mass spectrometry.

Authors:  F Mark H Jeffrey; J Shawn Roach; Charles J Storey; A Dean Sherry; Craig R Malloy
Journal:  Anal Biochem       Date:  2002-01-15       Impact factor: 3.365

6.  Probing the origin of acetyl-CoA and oxaloacetate entering the citric acid cycle from the 13C labeling of citrate released by perfused rat hearts.

Authors:  B Comte; G Vincent; B Bouchard; C Des Rosiers
Journal:  J Biol Chem       Date:  1997-10-17       Impact factor: 5.157

7.  Accelerated triacylglycerol turnover kinetics in hearts of diabetic rats include evidence for compartmented lipid storage.

Authors:  J Michael O'Donnell; Manuela Zampino; Nathaniel M Alpert; Matthew J Fasano; David L Geenen; E Douglas Lewandowski
Journal:  Am J Physiol Endocrinol Metab       Date:  2005-10-18       Impact factor: 4.310

8.  The absence of endogenous lipid oxidation in early stage heart failure exposes limits in lipid storage and turnover.

Authors:  J Michael O'Donnell; Aaron D Fields; Natalia Sorokina; E Douglas Lewandowski
Journal:  J Mol Cell Cardiol       Date:  2007-11-24       Impact factor: 5.000

9.  Evaluation of carbon flux and substrate selection through alternate pathways involving the citric acid cycle of the heart by 13C NMR spectroscopy.

Authors:  C R Malloy; A D Sherry; F M Jeffrey
Journal:  J Biol Chem       Date:  1988-05-25       Impact factor: 5.157

10.  Adult-onset hypothyroidism and the cerebral metabolism of (1,2-13C2) acetate as detected by 13C nuclear magnetic resonance.

Authors:  F Chapa; B Künnecke; R Calvo; F Escobar del Rey; G Morreale de Escobar; S Cerdán
Journal:  Endocrinology       Date:  1995-01       Impact factor: 4.736

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  2 in total

1.  Electron spray ionization mass spectrometry and 2D 31P NMR for monitoring 18O/16O isotope exchange and turnover rates of metabolic oligophosphates.

Authors:  Emirhan Nemutlu; Nenad Juranic; Song Zhang; Lawrence E Ward; Tumpa Dutta; K Sreekumaran Nair; Andre Terzic; Slobodan Macura; Petras P Dzeja
Journal:  Anal Bioanal Chem       Date:  2012-03-18       Impact factor: 4.142

Review 2.  Advanced stoichiometric analysis of metabolic networks of mammalian systems.

Authors:  Mehmet A Orman; Francois Berthiaume; Ioannis P Androulakis; Marianthi G Ierapetritou
Journal:  Crit Rev Biomed Eng       Date:  2011
  2 in total

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