Literature DB >> 20957371

Modeling the formation of in vitro filopodia.

K-C Lee1, A Gopinathan, J M Schwarz.   

Abstract

Filopodia are bundles of actin filaments that extend out ahead of the leading edge of a crawling cell to probe its upcoming environment. In vitro experiments (Vignjevic et al. in J Cell Biol 160:951-962, 2003) have determined the minimal ingredients required for the formation of filopodia from the dendritic-like morphology of the leading edge. We model these experiments using kinetic aggregation equations for the density of growing bundle tips. In mean field, we determine the bundle size distribution to be broad for bundle sizes smaller than a characteristic bundle size above which the distribution decays exponentially. Two-dimensional simulations incorporating both bundling and cross-linking measure a bundle size distribution that agrees qualitatively with mean field. The simulations also demonstrate a nonmonotonicity in the radial extent of the dendritic region as a function of capping protein concentration, as was observed in experiments, due to the interplay between percolation and the ratcheting of growing filaments off a spherical obstacle.

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Year:  2010        PMID: 20957371     DOI: 10.1007/s00285-010-0371-7

Source DB:  PubMed          Journal:  J Math Biol        ISSN: 0303-6812            Impact factor:   2.259


  39 in total

1.  Visualization and force measurement of branching by Arp2/3 complex and N-WASP in actin filament.

Authors:  Ikuko Fujiwara; Shiro Suetsugu; Sotaro Uemura; Tadaomi Takenawa; Shin'ichi Ishiwata
Journal:  Biochem Biophys Res Commun       Date:  2002-05-24       Impact factor: 3.575

2.  Lamellipodial versus filopodial mode of the actin nanomachinery: pivotal role of the filament barbed end.

Authors:  Marisan R Mejillano; Shin-ichiro Kojima; Derek Anthony Applewhite; Frank B Gertler; Tatyana M Svitkina; Gary G Borisy
Journal:  Cell       Date:  2004-08-06       Impact factor: 41.582

3.  Kinetics of filament bundling with attractive interactions.

Authors:  Xueping Yu; A E Carlsson
Journal:  Biophys J       Date:  2004-09-17       Impact factor: 4.033

4.  Lattice model for self-assembly with application to the formation of cytoskeletal-like structures.

Authors:  Shannon F Stewman; Aaron R Dinner
Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2007-07-11

5.  Self-organization of actin filament orientation in the dendritic-nucleation/array-treadmilling model.

Authors:  Thomas E Schaus; Edwin W Taylor; Gary G Borisy
Journal:  Proc Natl Acad Sci U S A       Date:  2007-04-17       Impact factor: 11.205

6.  Reconstitution of the transition from lamellipodium to filopodium in a membrane-free system.

Authors:  Lior Haviv; Yifat Brill-Karniely; Rachel Mahaffy; Frederic Backouche; Avinoam Ben-Shaul; Thomas D Pollard; Anne Bernheim-Groswasser
Journal:  Proc Natl Acad Sci U S A       Date:  2006-03-20       Impact factor: 11.205

7.  Arp2/3 complex is important for filopodia formation, growth cone motility, and neuritogenesis in neuronal cells.

Authors:  Farida Korobova; Tatyana Svitkina
Journal:  Mol Biol Cell       Date:  2008-02-06       Impact factor: 4.138

Review 8.  Mathematics of cell motility: have we got its number?

Authors:  Alex Mogilner
Journal:  J Math Biol       Date:  2008-05-07       Impact factor: 2.259

9.  Cofilin produces newly polymerized actin filaments that are preferred for dendritic nucleation by the Arp2/3 complex.

Authors:  Ilia Ichetovkin; Wayne Grant; John Condeelis
Journal:  Curr Biol       Date:  2002-01-08       Impact factor: 10.834

10.  Membrane-induced bundling of actin filaments.

Authors:  Allen P Liu; David L Richmond; Lutz Maibaum; Sander Pronk; Phillip L Geissler; Daniel A Fletcher
Journal:  Nat Phys       Date:  2008-08-31       Impact factor: 20.034

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  2 in total

1.  Physical model for the geometry of actin-based cellular protrusions.

Authors:  G Orly; M Naoz; N S Gov
Journal:  Biophys J       Date:  2014-08-05       Impact factor: 4.033

2.  Traceable stimulus-dependent rapid molecular changes in dendritic spines in the brain.

Authors:  Kazuya Kuboyama; Takafumi Inoue; Yuki Hashimotodani; Takuya Itoh; Tohsuke Suzuki; Aya Tetsuzawa; Yosuke Ohtsuka; Ryo Kinoshita; Ren Takara; Tohru Miyazawa; Pooja Gusain; Masanobu Kano; Maki K Yamada
Journal:  Sci Rep       Date:  2020-09-17       Impact factor: 4.379

  2 in total

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