Literature DB >> 20954740

Piriform spider silk sequences reveal unique repetitive elements.

David J Perry1, Daniela Bittencourt, Jessica Siltberg-Liberles, Elibio L Rech, Randolph V Lewis.   

Abstract

Orb-weaving spider silk fibers are assembled from very large, highly repetitive proteins. The repeated segments contain, in turn, short, simple, and repetitive amino acid motifs that account for the physical and mechanical properties of the assembled fiber. Of the six orb-weaver silk fibroins, the piriform silk that makes the attachment discs, which lashes the joints of the web and attaches dragline silk to surfaces, has not been previously characterized. Piriform silk protein cDNAs were isolated from phage libraries of three species: A. trifasciata , N. clavipes , and N. cruentata . The deduced amino acid sequences from these genes revealed two new repetitive motifs: an alternating proline motif, where every other amino acid is proline, and a glutamine-rich motif of 6-8 amino acids. Similar to other spider silk proteins, the repeated segments are large (>200 amino acids) and highly homogenized within a species. There is also substantial sequence similarity across the genes from the three species, with particular conservation of the repetitive motifs. Northern blot analysis revealed that the mRNA is larger than 11 kb and is expressed exclusively in the piriform glands of the spider. Phylogenetic analysis of the C-terminal regions of the new proteins with published spidroins robustly shows that the piriform sequences form an ortholog group.

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Year:  2010        PMID: 20954740      PMCID: PMC3037428          DOI: 10.1021/bm1007585

Source DB:  PubMed          Journal:  Biomacromolecules        ISSN: 1525-7797            Impact factor:   6.988


  42 in total

1.  Molecular architecture and evolution of a modular spider silk protein gene.

Authors:  C Y Hayashi; R V Lewis
Journal:  Science       Date:  2000-02-25       Impact factor: 47.728

2.  A general empirical model of protein evolution derived from multiple protein families using a maximum-likelihood approach.

Authors:  S Whelan; N Goldman
Journal:  Mol Biol Evol       Date:  2001-05       Impact factor: 16.240

3.  Isolation of a clone encoding a second dragline silk fibroin. Nephila clavipes dragline silk is a two-protein fiber.

Authors:  M B Hinman; R V Lewis
Journal:  J Biol Chem       Date:  1992-09-25       Impact factor: 5.157

4.  Silken toolkits: biomechanics of silk fibers spun by the orb web spider Argiope argentata (Fabricius 1775).

Authors:  Todd A Blackledge; Cheryl Y Hayashi
Journal:  J Exp Biol       Date:  2006-07       Impact factor: 3.312

5.  Structural disorder in silk proteins reveals the emergence of elastomericity.

Authors:  Cedric Dicko; David Porter; Jason Bond; John M Kenney; Fritz Vollrath
Journal:  Biomacromolecules       Date:  2007-12-14       Impact factor: 6.988

6.  Evidence from flagelliform silk cDNA for the structural basis of elasticity and modular nature of spider silks.

Authors:  C Y Hayashi; R V Lewis
Journal:  J Mol Biol       Date:  1998-02-06       Impact factor: 5.469

7.  Spider minor ampullate silk proteins contain new repetitive sequences and highly conserved non-silk-like "spacer regions".

Authors:  M A Colgin; R V Lewis
Journal:  Protein Sci       Date:  1998-03       Impact factor: 6.725

8.  A wheat HMW glutenin subunit gene reveals a highly repeated structure.

Authors:  T Sugiyama; A Rafalski; D Peterson; D Söll
Journal:  Nucleic Acids Res       Date:  1985-12-20       Impact factor: 16.971

9.  Protein disorder prediction: implications for structural proteomics.

Authors:  Rune Linding; Lars Juhl Jensen; Francesca Diella; Peer Bork; Toby J Gibson; Robert B Russell
Journal:  Structure       Date:  2003-11       Impact factor: 5.006

10.  Proline and processing of spider silks.

Authors:  Yi Liu; Alexander Sponner; David Porter; Fritz Vollrath
Journal:  Biomacromolecules       Date:  2007-12-04       Impact factor: 6.988

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  18 in total

1.  Spider glue proteins have distinct architectures compared with traditional spidroin family members.

Authors:  Keshav Vasanthavada; Xiaoyi Hu; Tiffany Tuton-Blasingame; Yang Hsia; Sujatha Sampath; Ryan Pacheco; Jordan Freeark; Arnold M Falick; Simon Tang; Justine Fong; Kristin Kohler; Coby La Mattina-Hawkins; Craig Vierra
Journal:  J Biol Chem       Date:  2012-08-27       Impact factor: 5.157

2.  Tuning the instrument: sonic properties in the spider's web.

Authors:  B Mortimer; A Soler; C R Siviour; R Zaera; F Vollrath
Journal:  J R Soc Interface       Date:  2016-09       Impact factor: 4.118

3.  Solution Structure of Tubuliform Spidroin N-Terminal Domain and Implications for pH Dependent Dimerization.

Authors:  Megija Šede; Jēkabs Fridmanis; Martins Otikovs; Jan Johansson; Anna Rising; Nina Kronqvist; Kristaps Jaudzems
Journal:  Front Mol Biosci       Date:  2022-06-14

4.  Peroxidase-catalysed interfacial adhesion of aquatic caddisworm silk.

Authors:  Ching-Shuen Wang; Huaizhong Pan; G Mahika Weerasekare; Russell J Stewart
Journal:  J R Soc Interface       Date:  2015-11-06       Impact factor: 4.118

Review 5.  Structure-function-property-design interplay in biopolymers: spider silk.

Authors:  Olena Tokareva; Matthew Jacobsen; Markus Buehler; Joyce Wong; David L Kaplan
Journal:  Acta Biomater       Date:  2013-08-17       Impact factor: 8.947

6.  Early events in the evolution of spider silk genes.

Authors:  James Starrett; Jessica E Garb; Amanda Kuelbs; Ugochi O Azubuike; Cheryl Y Hayashi
Journal:  PLoS One       Date:  2012-06-22       Impact factor: 3.240

Review 7.  Experimental strategies for the identification and characterization of adhesive proteins in animals: a review.

Authors:  Elise Hennebert; Barbara Maldonado; Peter Ladurner; Patrick Flammang; Romana Santos
Journal:  Interface Focus       Date:  2015-02-06       Impact factor: 3.906

8.  Full-length minor ampullate spidroin gene sequence.

Authors:  Gefei Chen; Xiangqin Liu; Yunlong Zhang; Senzhu Lin; Zijiang Yang; Jan Johansson; Anna Rising; Qing Meng
Journal:  PLoS One       Date:  2012-12-14       Impact factor: 3.240

9.  Nutrient deprivation induces property variations in spider gluey silk.

Authors:  Sean J Blamires; Vasav Sahni; Ali Dhinojwala; Todd A Blackledge; I-Min Tso
Journal:  PLoS One       Date:  2014-02-11       Impact factor: 3.240

Review 10.  The Potential of Silk and Silk-Like Proteins as Natural Mucoadhesive Biopolymers for Controlled Drug Delivery.

Authors:  Amanda E Brooks
Journal:  Front Chem       Date:  2015-11-26       Impact factor: 5.221

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