Literature DB >> 20952567

Genome sequence of the biocontrol agent Pantoea vagans strain C9-1.

Theo H M Smits1, Fabio Rezzonico, Tim Kamber, Alexander Goesmann, Carol A Ishimaru, Virginia O Stockwell, Jürg E Frey, Brion Duffy.   

Abstract

Pantoea vagans is a Gram-negative enterobacterial plant epiphyte of a broad range of plants. Here we report the 4.89-Mb genome sequence of P. vagans strain C9-1 (formerly Pantoea agglomerans), which is commercially registered for biological control of fire blight, a disease of pear and apple trees caused by Erwinia amylovora.

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Year:  2010        PMID： 20952567      PMCID： PMC3008540          DOI： 10.1128/JB.01122-10

Source DB:  PubMed          Journal:  J Bacteriol        ISSN： 0021-9193            Impact factor:   3.490


  13 in total

1.  The KEGG databases at GenomeNet.

Authors:  Minoru Kanehisa; Susumu Goto; Shuichi Kawashima; Akihiro Nakaya
Journal:  Nucleic Acids Res       Date:  2002-01-01       Impact factor: 16.971

2.  GenDB--an open source genome annotation system for prokaryote genomes.

Authors:  Folker Meyer; Alexander Goesmann; Alice C McHardy; Daniela Bartels; Thomas Bekel; Jörn Clausen; Jörn Kalinowski; Burkhard Linke; Oliver Rupp; Robert Giegerich; Alfred Pühler
Journal:  Nucleic Acids Res       Date:  2003-04-15       Impact factor: 16.971

3.  Development of joint application strategies for two microbial gene finders.

Authors:  Alice C McHardy; Alexander Goesmann; Alfred Pühler; Folker Meyer
Journal:  Bioinformatics       Date:  2004-02-26       Impact factor: 6.937

4.  Genome sequence of Pantoea ananatis LMG20103, the causative agent of Eucalyptus blight and dieback.

Authors:  Pieter De Maayer; Wai Yin Chan; Stephanus N Venter; Ian K Toth; Paul R J Birch; Fourie Joubert; Teresa A Coutinho
Journal:  J Bacteriol       Date:  2010-03-26       Impact factor: 3.490

5.  Complete genome sequence of the fire blight pathogen Erwinia amylovora CFBP 1430 and comparison to other Erwinia spp.

Authors:  Theo H M Smits; Fabio Rezzonico; Tim Kamber; Jochen Blom; Alexander Goesmann; Jürg E Frey; Brion Duffy
Journal:  Mol Plant Microbe Interact       Date:  2010-04       Impact factor: 4.171

6.  Microbial gene identification using interpolated Markov models.

Authors:  S L Salzberg; A L Delcher; S Kasif; O White
Journal:  Nucleic Acids Res       Date:  1998-01-15       Impact factor: 16.971

7.  Management of fire blight: a case study in microbial ecology.

Authors:  K B Johnson; V O Stockwell
Journal:  Annu Rev Phytopathol       Date:  1998       Impact factor: 13.078

8.  The presence of diverse IS elements and an avrPphD homologue that acts as a virulence factor on the pathogenicity plasmid of Erwinia herbicola pv. gypsophilae.

Authors:  Ming Guo; Shulamit Manulis; Henia Mor; Isaac Barash
Journal:  Mol Plant Microbe Interact       Date:  2002-07       Impact factor: 4.171

9.  Complete genome sequence of the fire blight pathogen Erwinia pyrifoliae DSM 12163T and comparative genomic insights into plant pathogenicity.

Authors:  Theo H M Smits; Sebastian Jaenicke; Fabio Rezzonico; Tim Kamber; Alexander Goesmann; Jürg E Frey; Brion Duffy
Journal:  BMC Genomics       Date:  2010-01-04       Impact factor: 3.969

10.  Genotypic comparison of Pantoea agglomerans plant and clinical strains.

Authors:  Fabio Rezzonico; Theo H M Smits; Emilio Montesinos; Jürg E Frey; Brion Duffy
Journal:  BMC Microbiol       Date:  2009-09-22       Impact factor: 3.605
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  31 in total

1.  Identification and regulation of a novel Citrobacter rodentium gut colonization fimbria (Gcf).

Authors:  Gustavo G Caballero-Flores; Matthew A Croxen; Verónica I Martínez-Santos; B Brett Finlay; José L Puente
Journal:  J Bacteriol       Date:  2015-02-09       Impact factor: 3.490

2.  Phylogenetic classification of diverse LysR-type transcriptional regulators of a model prokaryote Geobacter sulfurreducens.

Authors:  Julia Krushkal; Yanhua Qu; Derek R Lovley; Ronald M Adkins
Journal:  J Mol Evol       Date:  2012-04-20       Impact factor: 2.395

3.  Lipopolysaccharide biosynthesis genes discriminate between Rubus- and Spiraeoideae-infective genotypes of Erwinia amylovora.

Authors:  Fabio Rezzonico; Andrea Braun-Kiewnick; Rachel A Mann; Brendan Rodoni; Alexander Goesmann; Brion Duffy; Theo H M Smits
Journal:  Mol Plant Pathol       Date:  2012-05-15       Impact factor: 5.663

4.  Metabolic versatility and antibacterial metabolite biosynthesis are distinguishing genomic features of the fire blight antagonist Pantoea vagans C9-1.

Authors:  Theo H M Smits; Fabio Rezzonico; Tim Kamber; Jochen Blom; Alexander Goesmann; Carol A Ishimaru; Jürg E Frey; Virginia O Stockwell; Brion Duffy
Journal:  PLoS One       Date:  2011-07-15       Impact factor: 3.240

5.  The complete genome sequence of Pantoea ananatis AJ13355, an organism with great biotechnological potential.

Authors:  Yoshihiko Hara; Naoki Kadotani; Hiroshi Izui; Joanna I Katashkina; Tatiana M Kuvaeva; Irina G Andreeva; Lyubov I Golubeva; Dmitry B Malko; Vsevolod J Makeev; Sergey V Mashko; Yurii I Kozlov
Journal:  Appl Microbiol Biotechnol       Date:  2011-12-10       Impact factor: 4.813

6.  Comparative genomics of the Type VI secretion systems of Pantoea and Erwinia species reveals the presence of putative effector islands that may be translocated by the VgrG and Hcp proteins.

Authors:  Pieter De Maayer; Stephanus N Venter; Tim Kamber; Brion Duffy; Teresa A Coutinho; Theo H M Smits
Journal:  BMC Genomics       Date:  2011-11-24       Impact factor: 3.969

Review 7.  Detection of AI-2 receptors in genomes of Enterobacteriaceae suggests a role of type-2 quorum sensing in closed ecosystems.

Authors:  Fabio Rezzonico; Theo H M Smits; Brion Duffy
Journal:  Sensors (Basel)       Date:  2012-05-21       Impact factor: 3.576

8.  Draft Genome Sequence of Pantoea sp. Strain MBLJ3, Isolated in a Laboratory Environmental Control Study.

Authors:  Jing Zhang; Guo-Chiuan Hung; Haiyan Lei; Tianwei Li; Bingjie Li; Shien Tsai; Shyh-Ching Lo
Journal:  Genome Announc       Date:  2015-02-26

9.  Whole-genome comparative analysis of virulence genes unveils similarities and differences between endophytes and other symbiotic bacteria.

Authors:  Sebastiàn Lòpez-Fernàndez; Paolo Sonego; Marco Moretto; Michael Pancher; Kristof Engelen; Ilaria Pertot; Andrea Campisano
Journal:  Front Microbiol       Date:  2015-05-26       Impact factor: 5.640

10.  The large universal Pantoea plasmid LPP-1 plays a major role in biological and ecological diversification.

Authors:  Pieter De Maayer; Wai-Yin Chan; Jochen Blom; Stephanus N Venter; Brion Duffy; Theo H M Smits; Teresa A Coutinho
Journal:  BMC Genomics       Date:  2012-11-15       Impact factor: 3.969
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