Literature DB >> 20951114

Direct evidence for a phenylalanine site in the regulatory domain of phenylalanine hydroxylase.

Jun Li1, Udayar Ilangovan, S Colette Daubner, Andrew P Hinck, Paul F Fitzpatrick.   

Abstract

The hydroxylation of phenylalanine to tyrosine by the liver enzyme phenylalanine hydroxylase is regulated by the level of phenylalanine. Whether there is a distinct allosteric binding site for phenylalanine outside of the active site has been unclear. The enzyme contains an N-terminal regulatory domain that extends through Thr117. The regulatory domain of rat phenylalanine hydroxylase was expressed in Escherichia coli. The purified protein behaves as a dimer on a gel filtration column. In the presence of phenylalanine, the protein elutes earlier from the column, consistent with a conformational change in the presence of the amino acid. No change in elution is seen in the presence of the non-activating amino acid proline. ¹H-¹⁵N HSQC NMR spectra were obtained of the ¹⁵N-labeled protein alone and in the presence of phenylalanine or proline. A subset of the peaks in the spectrum exhibits chemical shift perturbation in the presence of phenylalanine, consistent with binding of phenylalanine at a specific site. No change in the NMR spectrum is seen in the presence of proline. These results establish that the regulatory domain of phenylalanine hydroxylase can bind phenylalanine, consistent with the presence of an allosteric site for the amino acid. Copyright Â
© 2010 Elsevier Inc. All rights reserved.

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Year:  2010        PMID: 20951114      PMCID: PMC3019263          DOI: 10.1016/j.abb.2010.10.009

Source DB:  PubMed          Journal:  Arch Biochem Biophys        ISSN: 0003-9861            Impact factor:   4.013


  26 in total

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Authors:  P F Fitzpatrick
Journal:  Annu Rev Biochem       Date:  1999       Impact factor: 23.643

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Authors:  J S Liberles; M Thórólfsson; A Martínez
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4.  Characterization of chimeric pterin-dependent hydroxylases: contributions of the regulatory domains of tyrosine and phenylalanine hydroxylase to substrate specificity.

Authors:  S C Daubner; P J Hillas; P F Fitzpatrick
Journal:  Biochemistry       Date:  1997-09-30       Impact factor: 3.162

5.  Expression and characterization of the catalytic core of tryptophan hydroxylase.

Authors:  G R Moran; S C Daubner; P F Fitzpatrick
Journal:  J Biol Chem       Date:  1998-05-15       Impact factor: 5.157

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Authors:  F Delaglio; S Grzesiek; G W Vuister; G Zhu; J Pfeifer; A Bax
Journal:  J Biomol NMR       Date:  1995-11       Impact factor: 2.835

7.  Regulation of phenylalanine hydroxylase activity by phenylalanine in vivo, in vitro, and in perfused rat liver.

Authors:  R Shiman; G E Mortimore; C M Schworer; D W Gray
Journal:  J Biol Chem       Date:  1982-10-10       Impact factor: 5.157

8.  Substrate activation of phenylalanine hydroxylase. A kinetic characterization.

Authors:  R Shiman; D W Gray
Journal:  J Biol Chem       Date:  1980-05-25       Impact factor: 5.157

9.  Regulation of phenylalanine hydroxylase: conformational changes upon phenylalanine binding detected by hydrogen/deuterium exchange and mass spectrometry.

Authors:  Jun Li; Lawrence J Dangott; Paul F Fitzpatrick
Journal:  Biochemistry       Date:  2010-04-20       Impact factor: 3.162

10.  Regulation of rat liver phenylalanine hydroxylase. I. Kinetic properties of the enzyme's iron and enzyme reduction site.

Authors:  R Shiman; D W Gray; M A Hill
Journal:  J Biol Chem       Date:  1994-10-07       Impact factor: 5.157

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  25 in total

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Authors:  Paul F Fitzpatrick
Journal:  Arch Biochem Biophys       Date:  2011-10-07       Impact factor: 4.013

2.  Kinetic mechanism of phenylalanine hydroxylase: intrinsic binding and rate constants from single-turnover experiments.

Authors:  Kenneth M Roberts; Jorge Alex Pavon; Paul F Fitzpatrick
Journal:  Biochemistry       Date:  2013-01-29       Impact factor: 3.162

3.  The phenylketonuria-associated substitution R68S converts phenylalanine hydroxylase to a constitutively active enzyme but reduces its stability.

Authors:  Crystal A Khan; Steve P Meisburger; Nozomi Ando; Paul F Fitzpatrick
Journal:  J Biol Chem       Date:  2019-01-23       Impact factor: 5.157

4.  Effects of a blend of Saccharomyces cerevisiae-based direct-fed microbial and fermentation products in the diet of newly weaned beef steers: growth performance, whole-blood immune gene expression, serum biochemistry, and plasma metabolome1.

Authors:  James A Adeyemi; David L Harmon; D M Paulus Compart; Ibukun M Ogunade
Journal:  J Anim Sci       Date:  2019-11-04       Impact factor: 3.159

5.  A new model for allosteric regulation of phenylalanine hydroxylase: implications for disease and therapeutics.

Authors:  Eileen K Jaffe; Linda Stith; Sarah H Lawrence; Mark Andrake; Roland L Dunbrack
Journal:  Arch Biochem Biophys       Date:  2013-01-11       Impact factor: 4.013

6.  Biophysical characterization of full-length human phenylalanine hydroxylase provides a deeper understanding of its quaternary structure equilibrium.

Authors:  Emilia C Arturo; Kushol Gupta; Michael R Hansen; Elias Borne; Eileen K Jaffe
Journal:  J Biol Chem       Date:  2019-05-10       Impact factor: 5.157

7.  Simulations of the regulatory ACT domain of human phenylalanine hydroxylase (PAH) unveil its mechanism of phenylalanine binding.

Authors:  Yunhui Ge; Elias Borne; Shannon Stewart; Michael R Hansen; Emilia C Arturo; Eileen K Jaffe; Vincent A Voelz
Journal:  J Biol Chem       Date:  2018-10-04       Impact factor: 5.157

8.  Regulation of phenylalanine hydroxylase: conformational changes upon phosphorylation detected by H/D exchange and mass spectrometry.

Authors:  Jun Li; Paul F Fitzpatrick
Journal:  Arch Biochem Biophys       Date:  2013-03-26       Impact factor: 4.013

9.  The solution structure of the regulatory domain of tyrosine hydroxylase.

Authors:  Shengnan Zhang; Tao Huang; Udayar Ilangovan; Andrew P Hinck; Paul F Fitzpatrick
Journal:  J Mol Biol       Date:  2013-12-17       Impact factor: 5.469

10.  An additional substrate binding site in a bacterial phenylalanine hydroxylase.

Authors:  Judith A Ronau; Lake N Paul; Julian E Fuchs; Isaac R Corn; Kyle T Wagner; Klaus R Liedl; Mahdi M Abu-Omar; Chittaranjan Das
Journal:  Eur Biophys J       Date:  2013-07-17       Impact factor: 1.733

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