Literature DB >> 20949406

Fresh frozen tissue: RNA extraction and quality control.

Johan Botling1, Patrick Micke.   

Abstract

Since RNA is believed to be the most vulnerable molecular component of unfixed tissue, preserved RNA integrity can be used as a general quality indicator in fresh frozen tissue biobanks. As the size of samples and biopsies often is small, in the range of millimeters or milligrams, it is important to implement quality control procedures adapted to minute the amounts of tissue. To this end, we here describe RNA extraction from one or a few frozen tissue sections and subsequent analysis of structural RNA integrity by microcapillary gel electrophoresis.

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Year:  2011        PMID: 20949406     DOI: 10.1007/978-1-59745-423-0_25

Source DB:  PubMed          Journal:  Methods Mol Biol        ISSN: 1064-3745


  7 in total

Review 1.  Quality assurance of RNA expression profiling in clinical laboratories.

Authors:  Weihua Tang; Zhiyuan Hu; Hind Muallem; Margaret L Gulley
Journal:  J Mol Diagn       Date:  2011-10-20       Impact factor: 5.568

2.  Integrating heterogeneous high-throughput data for meta-dimensional pharmacogenomics and disease-related studies.

Authors:  Emily R Holzinger; Marylyn D Ritchie
Journal:  Pharmacogenomics       Date:  2012-01       Impact factor: 2.533

3.  Superficial scrapings from breast tumors is a source for biobanking and research purposes.

Authors:  Ran Ma; Irma Fredriksson; Govindasamy-Muralidharan Karthik; Gregory Winn; Eva Darai-Ramqvist; Jonas Bergh; Johan Hartman
Journal:  Lab Invest       Date:  2014-04-28       Impact factor: 5.662

4.  Identification of RNase-resistant RNAs in Saccharomyces cerevisiae extracts: Separation from chromosomal DNA by selective precipitation.

Authors:  Blanca V Rodriguez; Eric T Malczewskyj; Joshua M Cabiya; L Kevin Lewis; Corina Maeder
Journal:  Anal Biochem       Date:  2015-09-28       Impact factor: 3.365

5.  Automated serial extraction of DNA and RNA from biobanked tissue specimens.

Authors:  Lucy Mathot; Monica Wallin; Tobias Sjöblom
Journal:  BMC Biotechnol       Date:  2013-08-19       Impact factor: 2.563

6.  RNA Extraction from Animal and Human's Cancerous Tissues: Does Tissue Matter?

Authors:  Ali Akbar Samadani; Novin Nikbakhsh; Sadegh Fattahi; Roghayeh Pourbagher; Seyyed Mohsen Aghajanpour Mir; Narges Mousavi Kani; Zeinab Abedian; Haleh Akhavan-Niaki
Journal:  Int J Mol Cell Med       Date:  2015

7.  Clinical implementation of RNA signatures for pharmacogenomic decision-making.

Authors:  Weihua Tang; Zhiyuan Hu; Hind Muallem; Margaret L Gulley
Journal:  Pharmgenomics Pers Med       Date:  2011-09-08
  7 in total

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