Literature DB >> 20948549

Genome annotation: man versus machine.

Nicola K Petty.   

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Year:  2010        PMID: 20948549     DOI: 10.1038/nrmicro2462

Source DB:  PubMed          Journal:  Nat Rev Microbiol        ISSN: 1740-1526            Impact factor:   60.633


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  4 in total

1.  Extensive mosaic structure revealed by the complete genome sequence of uropathogenic Escherichia coli.

Authors:  R A Welch; V Burland; G Plunkett; P Redford; P Roesch; D Rasko; E L Buckles; S-R Liou; A Boutin; J Hackett; D Stroud; G F Mayhew; D J Rose; S Zhou; D C Schwartz; N T Perna; H L T Mobley; M S Donnenberg; F R Blattner
Journal:  Proc Natl Acad Sci U S A       Date:  2002-12-05       Impact factor: 11.205

2.  A simple method for directional transcriptome sequencing using Illumina technology.

Authors:  Nicholas J Croucher; Maria C Fookes; Timothy T Perkins; Daniel J Turner; Samuel B Marguerat; Thomas Keane; Michael A Quail; Miao He; Sammey Assefa; Jürg Bähler; Robert A Kingsley; Julian Parkhill; Stephen D Bentley; Gordon Dougan; Nicholas R Thomson
Journal:  Nucleic Acids Res       Date:  2009-12       Impact factor: 16.971

3.  Genome reannotation of Escherichia coli CFT073 with new insights into virulence.

Authors:  Chengwei Luo; Gang-Qing Hu; Huaiqiu Zhu
Journal:  BMC Genomics       Date:  2009-11-22       Impact factor: 3.969

4.  Evaluation of three automated genome annotations for Halorhabdus utahensis.

Authors:  Peter Bakke; Nick Carney; Will Deloache; Mary Gearing; Kjeld Ingvorsen; Matt Lotz; Jay McNair; Pallavi Penumetcha; Samantha Simpson; Laura Voss; Max Win; Laurie J Heyer; A Malcolm Campbell
Journal:  PLoS One       Date:  2009-07-20       Impact factor: 3.240

  4 in total
  4 in total

1.  diArk 2.0 provides detailed analyses of the ever increasing eukaryotic genome sequencing data.

Authors:  Björn Hammesfahr; Florian Odronitz; Marcel Hellkamp; Martin Kollmar
Journal:  BMC Res Notes       Date:  2011-09-09

2.  Improving pan-genome annotation using whole genome multiple alignment.

Authors:  Samuel V Angiuoli; Julie C Dunning Hotopp; Steven L Salzberg; Hervé Tettelin
Journal:  BMC Bioinformatics       Date:  2011-06-30       Impact factor: 3.169

3.  An integrative strategy to identify the entire protein coding potential of prokaryotic genomes by proteogenomics.

Authors:  Ulrich Omasits; Adithi R Varadarajan; Michael Schmid; Sandra Goetze; Damianos Melidis; Marc Bourqui; Olga Nikolayeva; Maxime Québatte; Andrea Patrignani; Christoph Dehio; Juerg E Frey; Mark D Robinson; Bernd Wollscheid; Christian H Ahrens
Journal:  Genome Res       Date:  2017-11-15       Impact factor: 9.043

4.  Sequence and Structure Analysis of Biological Molecules Based on Computational Methods.

Authors:  Jia-Feng Yu; Yue-Dong Yang; Xiao Sun; Ji-Hua Wang
Journal:  Biomed Res Int       Date:  2015-07-05       Impact factor: 3.411

  4 in total

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