Literature DB >> 20945092

A transposon insertion single-gene knockout library and new ordered cosmid library for the model organism Streptomyces coelicolor A3(2).

L T Fernández-Martínez1, R Del Sol, M C Evans, S Fielding, P R Herron, G Chandra, P J Dyson.   

Abstract

A simple and high-throughput transposon mediated mutagenesis system employing in vitro shuttle transposon mutagenesis has been used to systematically mutagenise the Streptomyces coelicolor genome. To achieve the highest coverage, a new ordered cosmid library was also constructed. Individual cosmids from both the existing and new libraries were disrupted using the Tn5-based mini-transposon Tn5062. A total of 35,358 insertions were sequenced resulting in the disruption of 6,482 genes (83% of the predicted open reading frames). Complete information for both the newly generated cosmids as well as all the insertions has been uploaded onto a central database, StrepDB ( http://strepdb.streptomyces.org.uk/ ). All insertions, new cosmids and a range of transposon exchange cassettes are available for study of individual gene function.

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Year:  2010        PMID: 20945092     DOI: 10.1007/s10482-010-9518-1

Source DB:  PubMed          Journal:  Antonie Van Leeuwenhoek        ISSN: 0003-6072            Impact factor:   2.271


  21 in total

1.  Is PhoR-PhoP partner fidelity strict? PhoR is required for the activation of the pho regulon in Streptomyces coelicolor.

Authors:  Lorena T Fernández-Martínez; Fernando Santos-Beneit; Juan F Martín
Journal:  Mol Genet Genomics       Date:  2012-05-30       Impact factor: 3.291

2.  Pseudomonas fluorescens pirates both ferrioxamine and ferricoelichelin siderophores from Streptomyces ambofaciens.

Authors:  Justine Galet; Aurélie Deveau; Laurence Hôtel; Pascale Frey-Klett; Pierre Leblond; Bertrand Aigle
Journal:  Appl Environ Microbiol       Date:  2015-02-27       Impact factor: 4.792

3.  Large-Scale Transposition Mutagenesis of Streptomyces coelicolor Identifies Hundreds of Genes Influencing Antibiotic Biosynthesis.

Authors:  Zhong Xu; Yemin Wang; Keith F Chater; Hong-Yu Ou; H Howard Xu; Zixin Deng; Meifeng Tao
Journal:  Appl Environ Microbiol       Date:  2017-03-02       Impact factor: 4.792

4.  Mapping Transposon Insertions in Bacterial Genomes by Arbitrarily Primed PCR.

Authors:  José T Saavedra; Julia A Schwartzman; Michael S Gilmore
Journal:  Curr Protoc Mol Biol       Date:  2017-04-03

5.  Cytochrome bd Oxidase Has an Important Role in Sustaining Growth and Development of Streptomyces coelicolor A3(2) under Oxygen-Limiting Conditions.

Authors:  Marco Fischer; Dörte Falke; Carolin Naujoks; R Gary Sawers
Journal:  J Bacteriol       Date:  2018-07-25       Impact factor: 3.490

6.  The RNA polymerase omega factor RpoZ is regulated by PhoP and has an important role in antibiotic biosynthesis and morphological differentiation in Streptomyces coelicolor.

Authors:  Fernando Santos-Beneit; Mónica Barriuso-Iglesias; Lorena T Fernández-Martínez; Miriam Martínez-Castro; Alberto Sola-Landa; Antonio Rodríguez-García; Juan F Martín
Journal:  Appl Environ Microbiol       Date:  2011-09-09       Impact factor: 4.792

7.  Oxygen-dependent control of respiratory nitrate reduction in mycelium of Streptomyces coelicolor A3(2).

Authors:  Marco Fischer; Dörte Falke; Tony Pawlik; R Gary Sawers
Journal:  J Bacteriol       Date:  2014-09-15       Impact factor: 3.490

8.  The adnAB locus, encoding a putative helicase-nuclease activity, is essential in Streptomyces.

Authors:  Lingli Zhang; Hoang Chuong Nguyen; Ludovic Chipot; Emilie Piotrowski; Claire Bertrand; Annabelle Thibessard; Pierre Leblond
Journal:  J Bacteriol       Date:  2014-05-16       Impact factor: 3.490

9.  Cardiolipin synthase is required for Streptomyces coelicolor morphogenesis.

Authors:  Vinod Jyothikumar; Khanungkan Klanbut; John Tiong; James S Roxburgh; Iain S Hunter; Terry K Smith; Paul R Herron
Journal:  Mol Microbiol       Date:  2012-03-13       Impact factor: 3.501

10.  Structure-function relationships of two paralogous single-stranded DNA-binding proteins from Streptomyces coelicolor: implication of SsbB in chromosome segregation during sporulation.

Authors:  Tina Paradzik; Nives Ivic; Zelimira Filic; Babu A Manjasetty; Paul Herron; Marija Luic; Dusica Vujaklija
Journal:  Nucleic Acids Res       Date:  2013-02-07       Impact factor: 16.971

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