Literature DB >> 20943969

Codon optimization of human parvovirus B19 capsid genes greatly increases their expression in nonpermissive cells.

Ning Zhi1, Zhihong Wan, Xiaohong Liu, Susan Wong, Dong Joo Kim, Neal S Young, Sachiko Kajigaya.   

Abstract

Parvovirus B19 (B19V) is pathogenic for humans and has an extreme tropism for human erythroid progenitors. We report cell type-specific expression of the B19V capsid genes (VP1 and VP2) and greatly increased B19V capsid protein production in nonpermissive cells by codon optimization. Codon usage limitation, rather than promoter type and the 3' untranslated region of the capsid genes, appears to be a key factor in capsid protein production in nonpermissive cells. Moreover, B19 virus-like particles were successfully generated in nonpermissive cells by transient transfection of a plasmid carrying both codon-optimized VP1 and VP2 genes.

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Year:  2010        PMID: 20943969      PMCID: PMC3004325          DOI: 10.1128/JVI.00912-10

Source DB:  PubMed          Journal:  J Virol        ISSN: 0022-538X            Impact factor:   5.103


  11 in total

1.  Infection of the erythroid cell line, KU812Ep6 with human parvovirus B19 and its application to titration of B19 infectivity.

Authors:  E Miyagawa; T Yoshida; H Takahashi; K Yamaguchi; T Nagano; Y Kiriyama; K Okochi; H Sato
Journal:  J Virol Methods       Date:  1999-12       Impact factor: 2.014

2.  Effects of codon-optimization on protein expression by the human herpesvirus 6 and 7 U51 open reading frame.

Authors:  Birgit G Bradel-Tretheway; Zhu Zhen; Stephen Dewhurst
Journal:  J Virol Methods       Date:  2003-08       Impact factor: 2.014

3.  Molecular and functional analyses of a human parvovirus B19 infectious clone demonstrates essential roles for NS1, VP1, and the 11-kilodalton protein in virus replication and infectivity.

Authors:  Ning Zhi; Ian P Mills; Jun Lu; Susan Wong; Claudia Filippone; Kevin E Brown
Journal:  J Virol       Date:  2006-06       Impact factor: 5.103

4.  The 3' untranslated region of the B19 parvovirus capsid protein mRNAs inhibits its own mRNA translation in nonpermissive cells.

Authors:  C Pallier; A Greco; J Le Junter; A Saib; I Vassias; F Morinet
Journal:  J Virol       Date:  1997-12       Impact factor: 5.103

5.  Codon frequencies in 119 individual genes confirm consistent choices of degenerate bases according to genome type.

Authors:  R Grantham; C Gautier; M Gouy
Journal:  Nucleic Acids Res       Date:  1980-05-10       Impact factor: 16.971

6.  Human parvovirus B19 induces cell cycle arrest at G(2) phase with accumulation of mitotic cyclins.

Authors:  E Morita; K Tada; H Chisaka; H Asao; H Sato; N Yaegashi; K Sugamura
Journal:  J Virol       Date:  2001-08       Impact factor: 5.103

7.  Fine-tuning translation kinetics selection as the driving force of codon usage bias in the hepatitis A virus capsid.

Authors:  Lluís Aragonès; Susana Guix; Enric Ribes; Albert Bosch; Rosa M Pintó
Journal:  PLoS Pathog       Date:  2010-03-05       Impact factor: 6.823

8.  Ex vivo-generated CD36+ erythroid progenitors are highly permissive to human parvovirus B19 replication.

Authors:  Susan Wong; Ning Zhi; Claudia Filippone; Keyvan Keyvanfar; Sachiko Kajigaya; Kevin E Brown; Neal S Young
Journal:  J Virol       Date:  2007-12-26       Impact factor: 5.103

9.  Codon optimization and mRNA amplification effectively enhances the immunogenicity of the hepatitis C virus nonstructural 3/4A gene.

Authors:  L Frelin; G Ahlén; M Alheim; O Weiland; C Barnfield; P Liljeström; M Sällberg
Journal:  Gene Ther       Date:  2004-03       Impact factor: 5.250

10.  Plasmid encoding papillomavirus Type 16 (HPV16) DNA constructed with codon optimization improved the immunogenicity against HPV infection.

Authors:  Ying-Kit Cheung; Samuel Chak-Sum Cheng; Fion Wan-Yee Sin; Yong Xie
Journal:  Vaccine       Date:  2004-12-16       Impact factor: 3.641

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  13 in total

1.  Genetic variation in vitro and in vivo of an attenuated Lassa vaccine candidate.

Authors:  Juan C Zapata; Marco Goicochea; Yuka Nadai; Lindsay M Eyzaguirre; Jean K Carr; Luke J Tallon; Lisa Sadzewicz; Garry Myers; Claire M Fraser; Qi Su; Mahmoud Djavani; Igor S Lukashevich; Maria S Salvato
Journal:  J Virol       Date:  2013-12-11       Impact factor: 5.103

2.  Comparative [corrected] codon usage between the three main viruses in pestivirus genus and their natural susceptible livestock.

Authors:  Jian-hua Zhou; Zong-liang Gao; Jie Zhang; Hao-tai Chen; Zygmunt Pejsak; Li-na Ma; Yao-zhong Ding; Yong-sheng Liu
Journal:  Virus Genes       Date:  2012-03-07       Impact factor: 2.332

3.  The characteristics of the synonymous codon usage in hepatitis B virus and the effects of host on the virus in codon usage pattern.

Authors:  Ming-ren Ma; Xiao-qin Ha; Hui Ling; Mei-liang Wang; Fang-xin Zhang; Shang-di Zhang; Ge Li; Wei Yan
Journal:  Virol J       Date:  2011-12-15       Impact factor: 4.099

4.  Hepatitis A virus adaptation to cellular shutoff is driven by dynamic adjustments of codon usage and results in the selection of populations with altered capsids.

Authors:  M Isabel Costafreda; Francisco J Pérez-Rodriguez; Lucía D'Andrea; Susana Guix; Enric Ribes; Albert Bosch; Rosa M Pintó
Journal:  J Virol       Date:  2014-02-19       Impact factor: 5.103

5.  Expression of chicken parvovirus VP2 in chicken embryo fibroblasts requires codon optimization for production of naked DNA and vectored meleagrid herpesvirus type 1 vaccines.

Authors:  Stephen J Spatz; Jeremy D Volkening; Robert Mullis; Fenglan Li; John Mercado; Laszlo Zsak
Journal:  Virus Genes       Date:  2013-07-17       Impact factor: 2.332

6.  Human parvovirus B19 DNA replication induces a DNA damage response that is dispensable for cell cycle arrest at phase G2/M.

Authors:  Sai Lou; Yong Luo; Fang Cheng; Qinfeng Huang; Weiran Shen; Steve Kleiboeker; John F Tisdale; Zhengwen Liu; Jianming Qiu
Journal:  J Virol       Date:  2012-07-25       Impact factor: 5.103

7.  Codon optimization of the rabbit hemorrhagic disease virus (RHDV) capsid gene leads to increased gene expression in Spodoptera frugiperda 9 (Sf9) cells.

Authors:  Jingpeng Gao; Chunchun Meng; Zongyan Chen; Chuanfeng Li; Guangqing Liu
Journal:  J Vet Sci       Date:  2013-06-30       Impact factor: 1.672

8.  Characterization of chikungunya virus-like particles.

Authors:  Nitchakarn Noranate; Naokazu Takeda; Prukswan Chetanachan; Pathompong Sittisaman; Atchareeya A-Nuegoonpipat; Surapee Anantapreecha
Journal:  PLoS One       Date:  2014-09-29       Impact factor: 3.240

9.  Vaccinia and influenza A viruses select rather than adjust tRNAs to optimize translation.

Authors:  Mariana Pavon-Eternod; Alexandre David; Kimberly Dittmar; Peter Berglund; Tao Pan; Jack R Bennink; Jonathan W Yewdell
Journal:  Nucleic Acids Res       Date:  2012-12-18       Impact factor: 16.971

10.  Establishment of stably transfected cells constitutively expressing the full-length and truncated antigenic proteins of two genetically distinct mink astroviruses.

Authors:  Mehdi R M Bidokhti; Karin Ullman; Trine H Jensen; Mariann Chriél; Amin Mottahedin; Muhammad Munir; Anna Maria Andersson; Olivier Detournay; Anne Sofie Hammer; Claudia Baule
Journal:  PLoS One       Date:  2013-12-23       Impact factor: 3.240

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