Literature DB >> 20941573

Automatic formation of hypotheses on the relationships between structure of naphthalene analogs and bioluminescence response of bioreporter Pseudomonas fluorescens HK44.

J Trögl1, J Hálová, G Kuncová, P Pařík.   

Abstract

Seven hypotheses on relationships between the structure of naphthalene analogs and bioluminescence response of bioreporter Pseudomonas fluorescens were formulated using GUHA (General Unary Hypotheses Automaton) on a training set of 37 compounds. Prediction of bioluminescence response of 12 new naphthalene analogs was successful in 69 % cases and resulted in rejection of single hypothesis. The results demonstrate applicability of GUHA in structure-activity research, especially for qualitative data.

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Year:  2010        PMID: 20941573     DOI: 10.1007/s12223-010-0069-7

Source DB:  PubMed          Journal:  Folia Microbiol (Praha)        ISSN: 0015-5632            Impact factor:   2.099


  9 in total

1.  Virtual computational chemistry laboratory--design and description.

Authors:  Igor V Tetko; Johann Gasteiger; Roberto Todeschini; Andrea Mauri; David Livingstone; Peter Ertl; Vladimir A Palyulin; Eugene V Radchenko; Nikolay S Zefirov; Alexander S Makarenko; Vsevolod Yu Tanchuk; Volodymyr V Prokopenko
Journal:  J Comput Aided Mol Des       Date:  2005-06       Impact factor: 3.686

2.  Specific and quantitative assessment of naphthalene and salicylate bioavailability by using a bioluminescent catabolic reporter bacterium.

Authors:  A Heitzer; O F Webb; J E Thonnard; G S Sayler
Journal:  Appl Environ Microbiol       Date:  1992-06       Impact factor: 4.792

3.  Optical biosensor for environmental on-line monitoring of naphthalene and salicylate bioavailability with an immobilized bioluminescent catabolic reporter bacterium.

Authors:  A Heitzer; K Malachowsky; J E Thonnard; P R Bienkowski; D C White; G S Sayler
Journal:  Appl Environ Microbiol       Date:  1994-05       Impact factor: 4.792

4.  Estimating the toxicities of organic chemicals to bioluminescent bacteria and activated sludge.

Authors:  Shijin Ren; Paul D Frymier
Journal:  Water Res       Date:  2002-10       Impact factor: 11.236

5.  Interaction of NahR, a LysR-type transcriptional regulator, with the alpha subunit of RNA polymerase in the naphthalene degrading bacterium, Pseudomonas putida NCIB 9816-4.

Authors:  Woojun Park; Che Ok Jeon; Eugene L Madsen
Journal:  FEMS Microbiol Lett       Date:  2002-08-06       Impact factor: 2.742

6.  Antimicrobial activity and synergism of some substituted flavonoids.

Authors:  M A Alvarez; N B Debattista; N B Pappano
Journal:  Folia Microbiol (Praha)       Date:  2008-05-15       Impact factor: 2.099

7.  Antimicrobial activity of a series of thiosemicarbazones and their Zn(II) and Pd(II) complexes.

Authors:  I Kizilcikli; Y D Kurt; B Akkurt; A Y Genel; S Birteksöz; G Otük; B Ulküseven
Journal:  Folia Microbiol (Praha)       Date:  2007       Impact factor: 2.629

8.  Response of the bioluminescent bioreporter Pseudomonas fluorescens HK44 to analogs of naphthalene and salicylic acid.

Authors:  J Trögl; G Kuncová; L Kubicová; P Parík; J Hálová; K Demnerová; S Ripp; G S Sayler
Journal:  Folia Microbiol (Praha)       Date:  2007       Impact factor: 2.629

9.  In vitro antifungal activity of 2-(4-substituted phenyl)-3(2H)-isothiazolones.

Authors:  N Adibpour; A Khalaj; S Rezaee; M Daneshtalab
Journal:  Folia Microbiol (Praha)       Date:  2007       Impact factor: 2.629

  9 in total
  2 in total

1.  Bioluminescence of Pseudomonas fluorescens HK44 in the course of encapsulation into silica gel. Effect of methanol.

Authors:  J Trögl; G Kuncová; P Kuráň
Journal:  Folia Microbiol (Praha)       Date:  2011-01-21       Impact factor: 2.099

Review 2.  Pseudomonas fluorescens HK44: lessons learned from a model whole-cell bioreporter with a broad application history.

Authors:  Josef Trögl; Archana Chauhan; Steven Ripp; Alice C Layton; Gabriela Kuncová; Gary S Sayler
Journal:  Sensors (Basel)       Date:  2012-02-06       Impact factor: 3.576

  2 in total

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