Literature DB >> 20941025

Automated layer segmentation of macular OCT images using dual-scale gradient information.

Qi Yang1, Charles A Reisman, Zhenguo Wang, Yasufumi Fukuma, Masanori Hangai, Nagahisa Yoshimura, Atsuo Tomidokoro, Makoto Araie, Ali S Raza, Donald C Hood, Kinpui Chan.   

Abstract

A novel automated boundary segmentation algorithm is proposed for fast and reliable quantification of nine intra-retinal boundaries in optical coherence tomography (OCT) images. The algorithm employs a two-step segmentation schema based on gradient information in dual scales, utilizing local and complementary global gradient information simultaneously. A shortest path search is applied to optimize the edge selection. The segmentation algorithm was validated with independent manual segmentation and a reproducibility study. It demonstrates high accuracy and reproducibility in segmenting normal 3D OCT volumes. The execution time is about 16 seconds per volume (480x512x128 voxels). The algorithm shows potential for quantifying images from diseased retinas as well.

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Year:  2010        PMID: 20941025      PMCID: PMC3101081          DOI: 10.1364/OE.18.021293

Source DB:  PubMed          Journal:  Opt Express        ISSN: 1094-4087            Impact factor:   3.894


  31 in total

1.  Retinal thickness measurements from optical coherence tomography using a Markov boundary model.

Authors:  D Koozekanani; K Boyer; C Roberts
Journal:  IEEE Trans Med Imaging       Date:  2001-09       Impact factor: 10.048

2.  Robust segmentation of intraretinal layers in the normal human fovea using a novel statistical model based on texture and shape analysis.

Authors:  Vedran Kajić; Boris Povazay; Boris Hermann; Bernd Hofer; David Marshall; Paul L Rosin; Wolfgang Drexler
Journal:  Opt Express       Date:  2010-07-05       Impact factor: 3.894

3.  Ultrahigh-resolution high-speed retinal imaging using spectral-domain optical coherence tomography.

Authors:  Barry Cense; Nader Nassif; Teresa Chen; Mark Pierce; Seok-Hyun Yun; B Park; Brett Bouma; Guillermo Tearney; Johannes de Boer
Journal:  Opt Express       Date:  2004-05-31       Impact factor: 3.894

4.  Automated segmentation of the macula by optical coherence tomography.

Authors:  Tapio Fabritius; Shuichi Makita; Masahiro Miura; Risto Myllylä; Yoshiaki Yasuno
Journal:  Opt Express       Date:  2009-08-31       Impact factor: 3.894

5.  A computational approach to edge detection.

Authors:  J Canny
Journal:  IEEE Trans Pattern Anal Mach Intell       Date:  1986-06       Impact factor: 6.226

6.  Blood vessel contributions to retinal nerve fiber layer thickness profiles measured with optical coherence tomography.

Authors:  Donald C Hood; Brad Fortune; Stella N Arthur; Danli Xing; Jennifer A Salant; Robert Ritch; Jeffrey M Liebmann
Journal:  J Glaucoma       Date:  2008 Oct-Nov       Impact factor: 2.503

7.  Thickness of receptor and post-receptor retinal layers in patients with retinitis pigmentosa measured with frequency-domain optical coherence tomography.

Authors:  Donald C Hood; Christine E Lin; Margot A Lazow; Kirsten G Locke; Xian Zhang; David G Birch
Journal:  Invest Ophthalmol Vis Sci       Date:  2008-11-14       Impact factor: 4.799

8.  Selective loss of inner retinal layer thickness in type 1 diabetic patients with minimal diabetic retinopathy.

Authors:  Hille W van Dijk; Pauline H B Kok; Mona Garvin; Milan Sonka; J Hans Devries; Robert P J Michels; Mirjam E J van Velthoven; Reinier O Schlingemann; Frank D Verbraak; Michael D Abràmoff
Journal:  Invest Ophthalmol Vis Sci       Date:  2009-01-17       Impact factor: 4.799

9.  Detection of macular ganglion cell loss in glaucoma by Fourier-domain optical coherence tomography.

Authors:  Ou Tan; Vikas Chopra; Ake Tzu-Hui Lu; Joel S Schuman; Hiroshi Ishikawa; Gadi Wollstein; Rohit Varma; David Huang
Journal:  Ophthalmology       Date:  2009-09-10       Impact factor: 12.079

10.  Repeatability and reproducibility of macular thickness measurements using fourier domain optical coherence tomography.

Authors:  Alison Bruce; Ian E Pacey; Poonam Dharni; Andy J Scally; Brendan T Barrett
Journal:  Open Ophthalmol J       Date:  2009-04-20
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  88 in total

1.  Automated segmentation of intramacular layers in Fourier domain optical coherence tomography structural images from normal subjects.

Authors:  Xusheng Zhang; Siavash Yousefi; Lin An; Ruikang K Wang
Journal:  J Biomed Opt       Date:  2012-04       Impact factor: 3.170

2.  Early glaucoma involves both deep local, and shallow widespread, retinal nerve fiber damage of the macular region.

Authors:  Donald C Hood; Anastasia Slobodnick; Ali S Raza; Carlos Gustavo de Moraes; Christopher C Teng; Robert Ritch
Journal:  Invest Ophthalmol Vis Sci       Date:  2014-02-03       Impact factor: 4.799

3.  Effect of age on individual retinal layer thickness in normal eyes as measured with spectral-domain optical coherence tomography.

Authors:  Nazli Demirkaya; Hille W van Dijk; Sanne M van Schuppen; Michael D Abràmoff; Mona K Garvin; Milan Sonka; Reinier O Schlingemann; Frank D Verbraak
Journal:  Invest Ophthalmol Vis Sci       Date:  2013-07-22       Impact factor: 4.799

4.  The locations of circumpapillary glaucomatous defects seen on frequency-domain OCT scans.

Authors:  Donald C Hood; Diane L Wang; Ali S Raza; Carlos Gustavo de Moraes; Jeffrey M Liebmann; Robert Ritch
Journal:  Invest Ophthalmol Vis Sci       Date:  2013-11-08       Impact factor: 4.799

5.  Evaluation of inner retinal layers in eyes with temporal hemianopic visual loss from chiasmal compression using optical coherence tomography.

Authors:  Mário L R Monteiro; Kenzo Hokazono; Danilo B Fernandes; Luciana V F Costa-Cunha; Rafael M Sousa; Ali S Raza; Diane L Wang; Donald C Hood
Journal:  Invest Ophthalmol Vis Sci       Date:  2014-04-24       Impact factor: 4.799

6.  Multiple-object geometric deformable model for segmentation of macular OCT.

Authors:  Aaron Carass; Andrew Lang; Matthew Hauser; Peter A Calabresi; Howard S Ying; Jerry L Prince
Journal:  Biomed Opt Express       Date:  2014-03-04       Impact factor: 3.732

7.  Adaptive optics imaging of healthy and abnormal regions of retinal nerve fiber bundles of patients with glaucoma.

Authors:  Monica F Chen; Toco Y P Chui; Paula Alhadeff; Richard B Rosen; Robert Ritch; Alfredo Dubra; Donald C Hood
Journal:  Invest Ophthalmol Vis Sci       Date:  2015-01-08       Impact factor: 4.799

8.  RefMoB, a Reflectivity Feature Model-Based Automated Method for Measuring Four Outer Retinal Hyperreflective Bands in Optical Coherence Tomography.

Authors:  Douglas H Ross; Mark E Clark; Pooja Godara; Carrie Huisingh; Gerald McGwin; Cynthia Owsley; Katie M Litts; Richard F Spaide; Kenneth R Sloan; Christine A Curcio
Journal:  Invest Ophthalmol Vis Sci       Date:  2015-07       Impact factor: 4.799

9.  Robust total retina thickness segmentation in optical coherence tomography images using convolutional neural networks.

Authors:  Freerk G Venhuizen; Bram van Ginneken; Bart Liefers; Mark J J P van Grinsven; Sascha Fauser; Carel Hoyng; Thomas Theelen; Clara I Sánchez
Journal:  Biomed Opt Express       Date:  2017-06-16       Impact factor: 3.732

10.  Multilayered Deep Structure Tensor Delaunay Triangulation and Morphing Based Automated Diagnosis and 3D Presentation of Human Macula.

Authors:  Taimur Hassan; M Usman Akram; Mahmood Akhtar; Shoab Ahmad Khan; Ubaidullah Yasin
Journal:  J Med Syst       Date:  2018-10-04       Impact factor: 4.460

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