Literature DB >> 20937836

Naturally occurring osmolytes modulate the nanomechanical properties of polycystic kidney disease domains.

Liang Ma1, Meixiang Xu, Andres F Oberhauser.   

Abstract

Polycystin-1 (PC1) is a large membrane protein that is expressed along the renal tubule and exposed to a wide range of concentrations of urea. Urea is known as a common denaturing osmolyte that affects protein function by destabilizing their structure. However, it is known that the native conformation of proteins can be stabilized by protecting osmolytes that are found in the mammalian kidney. PC1 has an unusually long ectodomain with a multimodular structure including 16 Ig-like polycystic kidney disease (PKD) domains. Here, we used single-molecule force spectroscopy to study directly the effects of several naturally occurring osmolytes on the mechanical properties of PKD domains. This experimental approach more closely mimics the conditions found in vivo. We show that upon increasing the concentration of urea there is a remarkable decrease in the mechanical stability of human PKD domains. We found that protecting osmolytes such as sorbitol and trimethylamine N-oxide can counteract the denaturing effect of urea. Moreover, we found that the refolding rate of a structurally homologous archaeal PKD domain is significantly slowed down in urea, and this effect was counteracted by sorbitol. Our results demonstrate that naturally occurring osmolytes can have profound effects on the mechanical unfolding and refolding pathways of PKD domains. Based on these findings, we hypothesize that osmolytes such as urea or sorbitol may modulate PC1 mechanical properties and may lead to changes in the activation of the associated polycystin-2 channel or other intracellular events mediated by PC1.

Entities:  

Mesh:

Substances:

Year:  2010        PMID: 20937836      PMCID: PMC2992276          DOI: 10.1074/jbc.M110.183913

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  69 in total

1.  One rotary mechanism for F1-ATPase over ATP concentrations from millimolar down to nanomolar.

Authors:  Naoyoshi Sakaki; Rieko Shimo-Kon; Kengo Adachi; Hiroyasu Itoh; Shou Furuike; Eiro Muneyuki; Masasuke Yoshida; Kazuhiko Kinosita
Journal:  Biophys J       Date:  2004-12-30       Impact factor: 4.033

2.  Inhibition of protein aggregation in vitro and in vivo by a natural osmoprotectant.

Authors:  Zoya Ignatova; Lila M Gierasch
Journal:  Proc Natl Acad Sci U S A       Date:  2006-08-09       Impact factor: 11.205

Review 3.  The stability of globular proteins.

Authors:  C N Pace
Journal:  CRC Crit Rev Biochem       Date:  1975-05

4.  The molecular elasticity of the extracellular matrix protein tenascin.

Authors:  A F Oberhauser; P E Marszalek; H P Erickson; J M Fernandez
Journal:  Nature       Date:  1998-05-14       Impact factor: 49.962

Review 5.  Protein denaturation.

Authors:  C Tanford
Journal:  Adv Protein Chem       Date:  1968

6.  Rescue of glaucoma-causing mutant myocilin thermal stability by chemical chaperones.

Authors:  J Nicole Burns; Susan D Orwig; Julia L Harris; J Derrick Watkins; Douglas Vollrath; Raquel L Lieberman
Journal:  ACS Chem Biol       Date:  2010-05-21       Impact factor: 5.100

7.  The remarkable mechanical strength of polycystin-1 supports a direct role in mechanotransduction.

Authors:  Julia R Forman; Seema Qamar; Emanuele Paci; Richard N Sandford; Jane Clarke
Journal:  J Mol Biol       Date:  2005-06-17       Impact factor: 5.469

Review 8.  Renal medullary organic osmolytes.

Authors:  A Garcia-Perez; M B Burg
Journal:  Physiol Rev       Date:  1991-10       Impact factor: 37.312

Review 9.  Polycystic kidney diseases: from molecular discoveries to targeted therapeutic strategies.

Authors:  O Ibraghimov-Beskrovnaya; N Bukanov
Journal:  Cell Mol Life Sci       Date:  2008-02       Impact factor: 9.261

10.  Naturally occurring mutations alter the stability of polycystin-1 polycystic kidney disease (PKD) domains.

Authors:  Liang Ma; Meixiang Xu; Julia R Forman; Jane Clarke; Andres F Oberhauser
Journal:  J Biol Chem       Date:  2009-09-15       Impact factor: 5.157

View more
  10 in total

1.  Dynamics of protein folding and cofactor binding monitored by single-molecule force spectroscopy.

Authors:  Yi Cao; Hongbin Li
Journal:  Biophys J       Date:  2011-10-19       Impact factor: 4.033

2.  Low folding cooperativity of HP35 revealed by single-molecule force spectroscopy and molecular dynamics simulation.

Authors:  Chunmei Lv; Cheng Tan; Meng Qin; Dawei Zou; Yi Cao; Wei Wang
Journal:  Biophys J       Date:  2012-04-18       Impact factor: 4.033

3.  Polycystins and mechanotransduction: From physiology to disease.

Authors:  Christina Piperi; Efthimia K Basdra
Journal:  World J Exp Med       Date:  2015-11-20

4.  Probing osmolyte participation in the unfolding transition state of a protein.

Authors:  Lorna Dougan; Georgi Z Genchev; Hui Lu; Julio M Fernandez
Journal:  Proc Natl Acad Sci U S A       Date:  2011-05-25       Impact factor: 11.205

5.  Probing Small Molecule Binding to Unfolded Polyprotein Based on its Elasticity and Refolding.

Authors:  Ricksen S Winardhi; Qingnan Tang; Jin Chen; Mingxi Yao; Jie Yan
Journal:  Biophys J       Date:  2016-12-06       Impact factor: 4.033

Review 6.  Polycystins and partners: proposed role in mechanosensitivity.

Authors:  Kevin Retailleau; Fabrice Duprat
Journal:  J Physiol       Date:  2014-03-31       Impact factor: 5.182

Review 7.  Polycystins, focal adhesions and extracellular matrix interactions.

Authors:  Iain A Drummond
Journal:  Biochim Biophys Acta       Date:  2011-03-09

8.  Tracking unfolding and refolding reactions of single proteins using atomic force microscopy methods.

Authors:  Paul J Bujalowski; Andres F Oberhauser
Journal:  Methods       Date:  2013-03-20       Impact factor: 3.608

9.  Single-molecule chemo-mechanical unfolding reveals multiple transition state barriers in a small single-domain protein.

Authors:  Emily J Guinn; Bharat Jagannathan; Susan Marqusee
Journal:  Nat Commun       Date:  2015-04-17       Impact factor: 14.919

10.  Interdomain Linker Effect on the Mechanical Stability of Ig Domains in Titin.

Authors:  Bei Tong; Fang Tian; Peng Zheng
Journal:  Int J Mol Sci       Date:  2022-08-30       Impact factor: 6.208

  10 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.