Literature DB >> 20931374

Full-length cDNA overexpressor gene hunting system (FOX hunting system).

Mieko Higuchi1, Youichi Kondou, Takanari Ichikawa, Minami Matsui.   

Abstract

Full-length cDNAs (fl-cDNAs) are important resources for the characterization of gene function, since they contain all the information required for the production of functional RNAs and proteins. Large sets of fl-cDNA clones have been collected from several plant species and have become available for functional genomic analysis. We have developed a system for the identification of gene function by screening for transgenic plants ectopically expressing fl-cDNAs and named it the FOX (fl-cDNA overexpressor gene) hunting system. This system can be applied to almost all plant species without prior knowledge of their genome sequences because only fl-cDNAs are required. For utilization of the FOX hunting system, Agrobacterium libraries and Arabidopsis seeds carrying rice and Arabidopsis fl-cDNAs are available. Here, we will describe the procedure followed in the FOX hunting system from the generation of expression vectors carrying fl-cDNAs to the confirmation of phenotype in retransformed plants.

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Year:  2011        PMID: 20931374     DOI: 10.1007/978-1-60761-682-5_7

Source DB:  PubMed          Journal:  Methods Mol Biol        ISSN: 1064-3745


  6 in total

1.  Development of full-length cDNAs from Chinese cabbage (Brassica rapa Subsp. pekinensis) and identification of marker genes for defence response.

Authors:  Hiroshi Abe; Yoshihiro Narusaka; Issei Sasaki; Katsunori Hatakeyama; Sadasu Shin-I; Mari Narusaka; Kaoru Fukami-Kobayashi; Satoru Matsumoto; Masatomo Kobayashi
Journal:  DNA Res       Date:  2011-07-10       Impact factor: 4.458

2.  Generation of Wheat Transcription Factor FOX Rice Lines and Systematic Screening for Salt and Osmotic Stress Tolerance.

Authors:  Jinxia Wu; Zhiguo Zhang; Qian Zhang; Yayun Liu; Butuo Zhu; Jian Cao; Zhanpeng Li; Longzhi Han; Jizeng Jia; Guangyao Zhao; Xuehui Sun
Journal:  PLoS One       Date:  2015-07-15       Impact factor: 3.240

3.  Functional Identification and Characterization of Genes Cloned from Halophyte Seashore Paspalum Conferring Salinity and Cadmium Tolerance.

Authors:  Yu Chen; Chuanming Chen; Zhiqun Tan; Jun Liu; Lili Zhuang; Zhimin Yang; Bingru Huang
Journal:  Front Plant Sci       Date:  2016-02-09       Impact factor: 5.753

4.  Functional characterization of a type 2 metallothionein gene, SsMT2, from alkaline-tolerant Suaeda salsa.

Authors:  Shumei Jin; Chang Xu; Guoliang Li; Dan Sun; Ying Li; Xinwang Wang; Shenkui Liu
Journal:  Sci Rep       Date:  2017-12-20       Impact factor: 4.379

5.  Functional Identification of Salt-Stress-Related Genes Using the FOX Hunting System from Ipomoea pes-caprae.

Authors:  Mei Zhang; Hui Zhang; Jie-Xuan Zheng; Hui Mo; Kuai-Fei Xia; Shu-Guang Jian
Journal:  Int J Mol Sci       Date:  2018-11-02       Impact factor: 5.923

6.  Large-scale collection and analysis of full-length cDNAs from Brachypodium distachyon and integration with Pooideae sequence resources.

Authors:  Keiichi Mochida; Yukiko Uehara-Yamaguchi; Fuminori Takahashi; Takuhiro Yoshida; Tetsuya Sakurai; Kazuo Shinozaki
Journal:  PLoS One       Date:  2013-10-09       Impact factor: 3.240

  6 in total

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