Literature DB >> 2092823

The effect of the L-azetidine-2-carboxylic acid residue on protein conformation. I. Conformations of the residue and of dipeptides.

A Zagari1, G Némethy, H A Scheraga.   

Abstract

The L-azetidine-2-carboxylic acid (Aze) residue can be incorporated into proteins in the place of L-proline, of which it is the lower homologue. This substitution alters the properties of proteins, especially of collagen. Conformational constraints in N-acetyl-Aze-N'-methylamide and in several dipeptides containing Aze have been analyzed by means of energy computations. They have been compared with peptides containing Pro. The overall conformational preferences of Aze and Pro are similar, but several significant differences occur between them. In general, peptides containing Aze are somewhat more flexible than corresponding peptides containing Pro, because of a decrease in constraints caused by repulsive nonconvalent interactions of the atoms of the ring with neighboring residues. This results in an entropic effect that lessens the stability of ordered polypeptide conformations with respect to the disordered statistical coil. The collagen-like near-extended conformation is energetically less favorable for Aze than for Pro in the single residue and in dipeptides. This effect also contributes to a destabilization of the collagen triple helix. The influence of Aze on the conformation of polypeptides is discussed in the accompanying papers.

Entities:  

Mesh:

Substances:

Year:  1990        PMID: 2092823     DOI: 10.1002/bip.360300909

Source DB:  PubMed          Journal:  Biopolymers        ISSN: 0006-3525            Impact factor:   2.505


  11 in total

1.  Synthesis and evaluation of new endomorphin analogues modified at the Pro(2) residue.

Authors:  Domenica Torino; Adriano Mollica; Francesco Pinnen; Gino Lucente; Federica Feliciani; Peg Davis; Josephine Lai; Shou-Wu Ma; Frank Porreca; Victor J Hruby
Journal:  Bioorg Med Chem Lett       Date:  2009-06-06       Impact factor: 2.823

2.  Amino acid analog toxicity in primary rat neuronal and astrocyte cultures: implications for protein misfolding and TDP-43 regulation.

Authors:  Kalavathi Dasuri; Philip J Ebenezer; Romina M Uranga; Elena Gavilán; Le Zhang; Sun O K Fernandez-Kim; Annadora J Bruce-Keller; Jeffrey N Keller
Journal:  J Neurosci Res       Date:  2011-05-23       Impact factor: 4.164

3.  Protein misfolding and temperature up-shift cause G1 arrest via a common mechanism dependent on heat shock factor in Saccharomycescerevisiae.

Authors:  E W Trotter; L Berenfeld; S A Krause; G A Petsko; J V Gray
Journal:  Proc Natl Acad Sci U S A       Date:  2001-06-19       Impact factor: 11.205

4.  Up-regulation of the clusterin gene after proteotoxic stress: implication of HSF1-HSF2 heterocomplexes.

Authors:  Fabien Loison; Laure Debure; Philippe Nizard; Pascale le Goff; Denis Michel; Yves le Dréan
Journal:  Biochem J       Date:  2006-04-01       Impact factor: 3.857

5.  Homoserine toxicity in Saccharomyces cerevisiae and Candida albicans homoserine kinase (thr1Delta) mutants.

Authors:  Joanne M Kingsbury; John H McCusker
Journal:  Eukaryot Cell       Date:  2010-03-19

6.  The proton affinity of proline analogs using the kinetic method with full entropy analysis.

Authors:  Andrew F Kuntz; Andrew W Boynton; Geoffrey A David; Kathryn E Colyer; John C Poutsma
Journal:  J Am Soc Mass Spectrom       Date:  2002-01       Impact factor: 3.109

7.  Amino acid substrates impose polyamine, eIF5A, or hypusine requirement for peptide synthesis.

Authors:  Byung-Sik Shin; Takayuki Katoh; Erik Gutierrez; Joo-Ran Kim; Hiroaki Suga; Thomas E Dever
Journal:  Nucleic Acids Res       Date:  2017-08-21       Impact factor: 16.971

8.  Different Expression Levels of Human Mutant Ubiquitin B+1 (UBB+1) Can Modify Chronological Lifespan or Stress Resistance of Saccharomyces cerevisiae.

Authors:  Ana Joyce Muñoz-Arellano; Xin Chen; Andrea Molt; Eugenio Meza; Dina Petranovic
Journal:  Front Mol Neurosci       Date:  2018-06-08       Impact factor: 5.639

9.  FMN reduces Amyloid-β toxicity in yeast by regulating redox status and cellular metabolism.

Authors:  Xin Chen; Boyang Ji; Xinxin Hao; Xiaowei Li; Frederik Eisele; Thomas Nyström; Dina Petranovic
Journal:  Nat Commun       Date:  2020-02-13       Impact factor: 14.919

10.  A highly conserved mechanism for the detoxification and assimilation of the toxic phytoproduct L-azetidine-2-carboxylic acid in Aspergillus nidulans.

Authors:  Ada Biratsi; Alexandros Athanasopoulos; Vassili N Kouvelis; Christos Gournas; Vicky Sophianopoulou
Journal:  Sci Rep       Date:  2021-04-01       Impact factor: 4.379

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.