Literature DB >> 20923227

Cholesterol flip-flop: insights from free energy simulation studies.

Sunhwan Jo1, Huan Rui, Joseph B Lim, Jeffery B Klauda, Wonpil Im.   

Abstract

The mechanism of lipid flip-flop motion is important for maintaining the asymmetric distribution of lipids in a biological membrane. To explore the energetics and mechanism of passive cholesterol flip-flop and its dependence on chain saturation, we performed two-dimensional umbrella sampling simulations in DPPC, POPC, and DAPC (dipalmitoyl-, palmitoyloleoyl-, and diarachidonylphosphatidylcholine) and used the string method to identify the most probable flip-flop paths based on the two-dimensional free energy maps. The resulting paths indicate that cholesterol prefers to tilt first and then move to the bilayer center where the free energy barrier exists. The barrier is lower in DAPC than in DPPC or POPC, and the calculated flip-flop rates show that cholesterol flip-flop in a poly-unsaturated bilayer is faster than in more saturated bilayers. The free energy barrier results from the unfavorable enthalpic contribution arising from cholesterol-water/lipid interactions and the favorable entropic contribution due to increased lipid dynamics. While the cholesterol-water interaction has similar contributions to the barrier due to desolvation of the cholesterol hydroxyl group in all lipids, the cholesterol-lipid interaction has a much lower barrier in DAPC than in DPPC or POPC, resulting in the lower free energy barrier in DAPC.

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Year:  2010        PMID: 20923227     DOI: 10.1021/jp108166k

Source DB:  PubMed          Journal:  J Phys Chem B        ISSN: 1520-5207            Impact factor:   2.991


  28 in total

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3.  Multiscale Simulations of Biological Membranes: The Challenge To Understand Biological Phenomena in a Living Substance.

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Authors:  Richard M Venable; Andreas Krämer; Richard W Pastor
Journal:  Chem Rev       Date:  2019-02-12       Impact factor: 60.622

5.  Cholesterol: The Plasma Membrane's Constituent that Chooses Sides.

Authors:  Herre Jelger Risselada
Journal:  Biophys J       Date:  2019-05-07       Impact factor: 4.033

6.  Optimal Hydrophobicity and Reorientation of Amphiphilic Peptides Translocating through Membrane.

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Journal:  Biophys J       Date:  2018-08-18       Impact factor: 4.033

7.  Molecular simulation of rapid translocation of cholesterol, diacylglycerol, and ceramide in model raft and nonraft membranes.

Authors:  W F Drew Bennett; D Peter Tieleman
Journal:  J Lipid Res       Date:  2012-01-13       Impact factor: 5.922

8.  Cholesterol translocation in a phospholipid membrane.

Authors:  Amit Choubey; Rajiv K Kalia; Noah Malmstadt; Aiichiro Nakano; Priya Vashishta
Journal:  Biophys J       Date:  2013-06-04       Impact factor: 4.033

9.  Recent Developments and Applications of the CHARMM force fields.

Authors:  Xiao Zhu; Pedro E M Lopes; Alexander D Mackerell
Journal:  Wiley Interdiscip Rev Comput Mol Sci       Date:  2011-06-28

10.  Two Dimensional Window Exchange Umbrella Sampling for Transmembrane Helix Assembly.

Authors:  Soohyung Park; Wonpil Im
Journal:  J Chem Theory Comput       Date:  2012-11-19       Impact factor: 6.006

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