Literature DB >> 20921009

A hybrid approach to multi-scale modelling of cancer.

J M Osborne1, A Walter, S K Kershaw, G R Mirams, A G Fletcher, P Pathmanathan, D Gavaghan, O E Jensen, P K Maini, H M Byrne.   

Abstract

In this paper, we review multi-scale models of solid tumour growth and discuss a middle-out framework that tracks individual cells. By focusing on the cellular dynamics of a healthy colorectal crypt and its invasion by mutant, cancerous cells, we compare a cell-centre, a cell-vertex and a continuum model of cell proliferation and movement. All models reproduce the basic features of a healthy crypt: cells proliferate near the crypt base, they migrate upwards and are sloughed off near the top. The models are used to establish conditions under which mutant cells are able to colonize the crypt either by top-down or by bottom-up invasion. While the continuum model is quicker and easier to implement, it can be difficult to relate system parameters to measurable biophysical quantities. Conversely, the greater detail inherent in the multi-scale models means that experimentally derived parameters can be incorporated and, therefore, these models offer greater scope for understanding normal and diseased crypts, for testing and identifying new therapeutic targets and for predicting their impacts.

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Mesh:

Year:  2010        PMID: 20921009     DOI: 10.1098/rsta.2010.0173

Source DB:  PubMed          Journal:  Philos Trans A Math Phys Eng Sci        ISSN: 1364-503X            Impact factor:   4.226


  34 in total

1.  On an infrastructure to support sharing and aggregating pre- and post-publication systems biology research data.

Authors:  Mark Slaymaker; James Osborne; Andrew Simpson; David Gavaghan
Journal:  Syst Synth Biol       Date:  2012-08-03

2.  A one-dimensional individual-based mechanical model of cell movement in heterogeneous tissues and its coarse-grained approximation.

Authors:  R J Murphy; P R Buenzli; R E Baker; M J Simpson
Journal:  Proc Math Phys Eng Sci       Date:  2019-07-24       Impact factor: 2.704

Review 3.  Mathematical modeling of tumor-immune cell interactions.

Authors:  Grace E Mahlbacher; Kara C Reihmer; Hermann B Frieboes
Journal:  J Theor Biol       Date:  2019-03-02       Impact factor: 2.691

4.  Evaluation of uptake and distribution of gold nanoparticles in solid tumors.

Authors:  Christopher G England; André M Gobin; Hermann B Frieboes
Journal:  Eur Phys J Plus       Date:  2015-11-19       Impact factor: 3.911

5.  The formation of tight tumor clusters affects the efficacy of cell cycle inhibitors: a hybrid model study.

Authors:  Munju Kim; Damon Reed; Katarzyna A Rejniak
Journal:  J Theor Biol       Date:  2014-03-05       Impact factor: 2.691

6.  Model of vascular desmoplastic multispecies tumor growth.

Authors:  Chin F Ng; Hermann B Frieboes
Journal:  J Theor Biol       Date:  2017-05-18       Impact factor: 2.691

7.  Retinal stem cells modulate proliferative parameters to coordinate post-embryonic morphogenesis in the eye of fish.

Authors:  Erika Tsingos; Burkhard Höckendorf; Thomas Sütterlin; Stephan Kirchmaier; Niels Grabe; Lazaro Centanin; Joachim Wittbrodt
Journal:  Elife       Date:  2019-03-26       Impact factor: 8.140

8.  Relating cell shape and mechanical stress in a spatially disordered epithelium using a vertex-based model.

Authors:  Alexander Nestor-Bergmann; Georgina Goddard; Sarah Woolner; Oliver E Jensen
Journal:  Math Med Biol       Date:  2018-03-16       Impact factor: 1.854

Review 9.  Multiscale Modeling in the Clinic: Drug Design and Development.

Authors:  Colleen E Clancy; Gary An; William R Cannon; Yaling Liu; Elebeoba E May; Peter Ortoleva; Aleksander S Popel; James P Sluka; Jing Su; Paolo Vicini; Xiaobo Zhou; David M Eckmann
Journal:  Ann Biomed Eng       Date:  2016-02-17       Impact factor: 3.934

Review 10.  Genetic variants in Alzheimer disease - molecular and brain network approaches.

Authors:  Chris Gaiteri; Sara Mostafavi; Christopher J Honey; Philip L De Jager; David A Bennett
Journal:  Nat Rev Neurol       Date:  2016-06-10       Impact factor: 42.937

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