Literature DB >> 20920832

Differences in exon expression and alternatively spliced genes in blood of multiple sclerosis compared to healthy control subjects.

Yingfang Tian1, Michelle L Apperson, Bradley P Ander, Dazhi Liu, Boryana S Stomova, Glen C Jickling, Richelle Enriquez, Mark A Agius, Frank R Sharp.   

Abstract

Using whole genome exon microarrays 120 exons were differentially expressed between medication-free multiple sclerosis (MS) subjects in remission and healthy control subjects (HS) (p<0.001, fold change>|1.2|). These exons differentiated MS from HS using cluster analyses, principal components analyses (PCAs) and cross-validation. In addition, 340 genes (transcripts) were predicted to be alternatively spliced in MS compared to HS. These findings may provide insight into the pathophysiology of MS and potentially provide prognostic and diagnostic biomarkers. However, given that multiple comparisons were performed on a very small sample, these preliminary findings require confirmation using a much larger independent cohort.
Copyright © 2010 Elsevier B.V. All rights reserved.

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Year:  2011        PMID: 20920832     DOI: 10.1016/j.jneuroim.2010.09.001

Source DB:  PubMed          Journal:  J Neuroimmunol        ISSN: 0165-5728            Impact factor:   3.478


  9 in total

Review 1.  MECHANISMS IN ENDOCRINOLOGY: Alternative splicing: the new frontier in diabetes research.

Authors:  Jonàs Juan-Mateu; Olatz Villate; Décio L Eizirik
Journal:  Eur J Endocrinol       Date:  2015-12-01       Impact factor: 6.664

2.  mRNA blood expression patterns in new-onset idiopathic pediatric epilepsy.

Authors:  Hansel M Greiner; Paul S Horn; Katherine Holland; James Collins; Andrew D Hershey; Tracy A Glauser
Journal:  Epilepsia       Date:  2012-11-21       Impact factor: 5.864

Review 3.  Body fluid biomarkers in multiple sclerosis: how far we have come and how they could affect the clinic now and in the future.

Authors:  Itay Raphael; Johanna Webb; Olaf Stuve; William Haskins; Thomas Forsthuber
Journal:  Expert Rev Clin Immunol       Date:  2014-12-18       Impact factor: 4.473

4.  Blood RNA profiling in a large cohort of multiple sclerosis patients and healthy controls.

Authors:  Dorothee Nickles; Hsuan P Chen; Michael M Li; Pouya Khankhanian; Lohith Madireddy; Stacy J Caillier; Adam Santaniello; Bruce A C Cree; Daniel Pelletier; Stephen L Hauser; Jorge R Oksenberg; Sergio E Baranzini
Journal:  Hum Mol Genet       Date:  2013-06-06       Impact factor: 6.150

5.  Transcriptome Analysis of the Human Striatum in Tourette Syndrome.

Authors:  Jessica B Lennington; Gianfilippo Coppola; Yuko Kataoka-Sasaki; Thomas V Fernandez; Dean Palejev; Yifan Li; Anita Huttner; Mihovil Pletikos; Nenad Sestan; James F Leckman; Flora M Vaccarino
Journal:  Biol Psychiatry       Date:  2014-07-24       Impact factor: 13.382

Review 6.  Molecular markers and mechanisms of stroke: RNA studies of blood in animals and humans.

Authors:  Frank R Sharp; Glen C Jickling; Boryana Stamova; Yingfang Tian; Xinhua Zhan; DaZhi Liu; Beth Kuczynski; Christopher D Cox; Bradley P Ander
Journal:  J Cereb Blood Flow Metab       Date:  2011-04-20       Impact factor: 6.200

7.  Meta-Analysis of Multiple Sclerosis Microarray Data Reveals Dysregulation in RNA Splicing Regulatory Genes.

Authors:  Elvezia Maria Paraboschi; Giulia Cardamone; Valeria Rimoldi; Donato Gemmati; Marta Spreafico; Stefano Duga; Giulia Soldà; Rosanna Asselta
Journal:  Int J Mol Sci       Date:  2015-09-30       Impact factor: 5.923

8.  Nova1 is a master regulator of alternative splicing in pancreatic beta cells.

Authors:  Olatz Villate; Jean-Valery Turatsinze; Loriana G Mascali; Fabio A Grieco; Tatiane C Nogueira; Daniel A Cunha; Tarlliza R Nardelli; Michael Sammeth; Vishal A Salunkhe; Jonathan L S Esguerra; Lena Eliasson; Lorella Marselli; Piero Marchetti; Decio L Eizirik
Journal:  Nucleic Acids Res       Date:  2014-09-23       Impact factor: 16.971

9.  Alternative Splicing of Putative Stroke/Vascular Risk Factor Genes Expressed in Blood Following Ischemic Stroke Is Sexually Dimorphic and Cause-Specific.

Authors:  Cheryl Dykstra-Aiello; Frank R Sharp; Glen C Jickling; Heather Hull; Farah Hamade; Natasha Shroff; Marc Durocher; Xiyuan Cheng; Xinhua Zhan; DaZhi Liu; Bradley P Ander; Boryana S Stamova
Journal:  Front Neurol       Date:  2020-10-22       Impact factor: 4.003

  9 in total

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