Literature DB >> 20888800

Functional annotation of heart enriched mitochondrial genes GBAS and CHCHD10 through guilt by association.

Ruben S R M Martherus1, Willem Sluiter, Erika D J Timmer, Sabina J V VanHerle, Hubert J M Smeets, Torik A Y Ayoubi.   

Abstract

Despite the mitochondria ubiquitous nature many of their components display divergences in their expression profile across different tissues. Using the bioinformatics-approach of guilt by association (GBA) we exploited these variations to predict the function of two so far poorly annotated genes: Coiled-coil-helix-coiled-coil-helix domain containing 10 (CHCHD10) and glioblastoma amplified sequence (GBAS). We predicted both genes to be involved in oxidative phosphorylation. Through in vitro experiments using gene-knockdown we could indeed confirm this and furthermore we asserted CHCHD10 to play a role in complex IV activity.
Copyright © 2010. Published by Elsevier Inc.

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Year:  2010        PMID: 20888800     DOI: 10.1016/j.bbrc.2010.09.109

Source DB:  PubMed          Journal:  Biochem Biophys Res Commun        ISSN: 0006-291X            Impact factor:   3.575


  17 in total

Review 1.  Mitochondrial CHCHD-Containing Proteins: Physiologic Functions and Link with Neurodegenerative Diseases.

Authors:  Zhi-Dong Zhou; Wuan-Ting Saw; Eng-King Tan
Journal:  Mol Neurobiol       Date:  2016-09-08       Impact factor: 5.590

2.  Application of Large-Scale Aptamer-Based Proteomic Profiling to Planned Myocardial Infarctions.

Authors:  Jaison Jacob; Debby Ngo; Nancy Finkel; Rebecca Pitts; Scott Gleim; Mark D Benson; Michelle J Keyes; Laurie A Farrell; Thomas Morgan; Lori L Jennings; Robert E Gerszten
Journal:  Circulation       Date:  2017-12-08       Impact factor: 29.690

3.  The cellular stress proteins CHCHD10 and MNRR1 (CHCHD2): Partners in mitochondrial and nuclear function and dysfunction.

Authors:  Neeraja Purandare; Mallika Somayajulu; Maik Hüttemann; Lawrence I Grossman; Siddhesh Aras
Journal:  J Biol Chem       Date:  2018-03-14       Impact factor: 5.157

4.  Comparative study of the neurotrophic effects elicited by VEGF-B and GDNF in preclinical in vivo models of Parkinson's disease.

Authors:  X Yue; D J Hariri; B Caballero; S Zhang; M J Bartlett; O Kaut; D W Mount; U Wüllner; S J Sherman; T Falk
Journal:  Neuroscience       Date:  2013-11-27       Impact factor: 3.590

5.  Mutation in the novel nuclear-encoded mitochondrial protein CHCHD10 in a family with autosomal dominant mitochondrial myopathy.

Authors:  Senda Ajroud-Driss; Faisal Fecto; Kaouther Ajroud; Irfan Lalani; Sarah E Calvo; Vamsi K Mootha; Han-Xiang Deng; Nailah Siddique; Albert J Tahmoush; Terry D Heiman-Patterson; Teepu Siddique
Journal:  Neurogenetics       Date:  2014-09-06       Impact factor: 2.660

6.  De novo 393 kb microdeletion of 7p11.2 characterized by aCGH in a boy with psychomotor retardation and dysmorphic features.

Authors:  Konstantinos Varvagiannis; Ioannis Papoulidis; Theodora Koromila; Konstantinos Kefalas; Monika Ziegler; Thomas Liehr; Michael B Petersen; Yolanda Gyftodimou; Emmanouil Manolakos
Journal:  Meta Gene       Date:  2014-04-15

7.  A high resolution atlas of gene expression in the domestic sheep (Ovis aries).

Authors:  Emily L Clark; Stephen J Bush; Mary E B McCulloch; Iseabail L Farquhar; Rachel Young; Lucas Lefevre; Clare Pridans; Hiu G Tsang; Chunlei Wu; Cyrus Afrasiabi; Mick Watson; C Bruce Whitelaw; Tom C Freeman; Kim M Summers; Alan L Archibald; David A Hume
Journal:  PLoS Genet       Date:  2017-09-15       Impact factor: 5.917

Review 8.  MNRR1, a Biorganellar Regulator of Mitochondria.

Authors:  Lawrence I Grossman; Neeraja Purandare; Rooshan Arshad; Stephanie Gladyck; Mallika Somayajulu; Maik Hüttemann; Siddhesh Aras
Journal:  Oxid Med Cell Longev       Date:  2017-06-08       Impact factor: 6.543

9.  A mitochondrial origin for frontotemporal dementia and amyotrophic lateral sclerosis through CHCHD10 involvement.

Authors:  Sylvie Bannwarth; Samira Ait-El-Mkadem; Annabelle Chaussenot; Emmanuelle C Genin; Sandra Lacas-Gervais; Konstantina Fragaki; Laetitia Berg-Alonso; Yusuke Kageyama; Valérie Serre; David G Moore; Annie Verschueren; Cécile Rouzier; Isabelle Le Ber; Gaëlle Augé; Charlotte Cochaud; Françoise Lespinasse; Karine N'Guyen; Anne de Septenville; Alexis Brice; Patrick Yu-Wai-Man; Hiromi Sesaki; Jean Pouget; Véronique Paquis-Flucklinger
Journal:  Brain       Date:  2014-06-16       Impact factor: 13.501

10.  A gene expression atlas of the domestic pig.

Authors:  Tom C Freeman; Alasdair Ivens; J Kenneth Baillie; Dario Beraldi; Mark W Barnett; David Dorward; Alison Downing; Lynsey Fairbairn; Ronan Kapetanovic; Sobia Raza; Andru Tomoiu; Ramiro Alberio; Chunlei Wu; Andrew I Su; Kim M Summers; Christopher K Tuggle; Alan L Archibald; David A Hume
Journal:  BMC Biol       Date:  2012-11-15       Impact factor: 7.431

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