Literature DB >> 20886259

RNA editing in P transposable element read-through transcripts in Drosophila melanogaster.

Tomokazu Fukui1, Masanobu Itoh.   

Abstract

RNA editing is proposed as a modulator of transcriptomes, but its biological impact has not been fully elucidated. In particular, its importance for transposable elements is controversial. We found RNA editing on antisense read-through transcripts of KP elements, one of the deletion derivatives of P transposable elements in Drosophila melanogaster. Three kinds of RNA editing were detected at 20 sites around the terminal inverted repeats (TIR); 15 A-to-G, four U-to-C, and one C-to-U conversions. A-to-G conversions are suggested to be attributed to A-to-I RNA editing on KP element RNAs, because inosine (I) in RNA is recognized as G by reverse transcriptase. TIRs were deduced to form dsRNAs as a putative target of ADAR. This is the first report of RNA editing on mobile elements of Drosophila.

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Year:  2010        PMID: 20886259     DOI: 10.1007/s10709-010-9499-z

Source DB:  PubMed          Journal:  Genetica        ISSN: 0016-6707            Impact factor:   1.082


  62 in total

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2.  Genomic P elements and P-M characteristics of eastern Australian populations of Drosophila melanogaster.

Authors:  M Itoh; R C Woodruff; M A Leone; I A Boussy
Journal:  Genetica       Date:  1999       Impact factor: 1.082

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Authors:  J D Andrews; G B Gloor
Journal:  Genetics       Date:  1995-10       Impact factor: 4.562

4.  Immunocytochemical localization of vigilin, a tRNA-binding protein, after cell fractionation and within the exocrine pancreatic cell of the rat.

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Journal:  Ann Anat       Date:  1996-08       Impact factor: 2.698

5.  RNA editing in plant mitochondria.

Authors:  P S Covello; M W Gray
Journal:  Nature       Date:  1989-10-19       Impact factor: 49.962

6.  RNA editing in plant mitochondria.

Authors:  R Hiesel; B Wissinger; W Schuster; A Brennicke
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Journal:  Biochem J       Date:  2005-09-15       Impact factor: 3.857

8.  DDP1, a single-stranded nucleic acid-binding protein of Drosophila, associates with pericentric heterochromatin and is functionally homologous to the yeast Scp160p, which is involved in the control of cell ploidy.

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Journal:  EMBO J       Date:  1999-07-01       Impact factor: 11.598

9.  Analysis of P transposable element functions in Drosophila.

Authors:  R E Karess; G M Rubin
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10.  Molecular cloning of an apolipoprotein B messenger RNA editing protein.

Authors:  B Teng; C F Burant; N O Davidson
Journal:  Science       Date:  1993-06-18       Impact factor: 47.728

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  2 in total

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  2 in total

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