Literature DB >> 20882555

Two dimensional electrophoretic analysis of human tears: collection method in dry eye syndrome.

Aluru Venkata Saijyothi1, Narayanasamy Angayarkanni, Chandran Syama, Tatu Utpal, Agarwal Shweta, Srinivasan Bhaskar, Iyer Krishnan Geetha, Pillai S Vinay, Maruthamuthu Thennarasu, Rajappa M Sivakumar, Padmanabhan Prema.   

Abstract

Tear proteomics, by 2-DE, can give a fingerprint of the protein profile, which is well suited in clinical proteomics for biomarker identification and in diagnostics. The mode of tear collection can influence the representation of the proteins in the tear and therefore it is important to use the appropriate method. In this study, capillary and Schirmer mode of tear collection was done in the healthy controls and the Schirmer method was validated in dry eye syndrome conditions. 2-D PAGE of normal and dry eye tear was performed using pH 3-10 linear IPG strips followed by 13% SDS-PAGE. The spot intensity was analyzed by the PD quest software. The two methods were compared using Bland-Altman statistical tool. The 2-D map of capillary and Schirmer tear showed 147 ± 8 spots and 145 ± 7 spots respectively. Both the collection methods were in agreement with each other and were comparable. Dry eye tear protein showed differential expression of proteins as observed in 25-35 kDa region. One of the significantly reduced protein was identified as proline-rich 4 protein. Schirmer method of tear collection is reliable in patients with dry eye, which can display the differential protein expression and help in biomarker identification.

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Year:  2010        PMID: 20882555     DOI: 10.1002/elps.201000271

Source DB:  PubMed          Journal:  Electrophoresis        ISSN: 0173-0835            Impact factor:   3.535


  14 in total

1.  A novel and less invasive technique to assess cytokine profile of vitreous in patients of diabetic macular oedema.

Authors:  G Srividya; M Jain; K Mahalakshmi; S Gayathri; R Raman; N Angayarkanni
Journal:  Eye (Lond)       Date:  2018-01-05       Impact factor: 3.775

2.  iTRAQ quantitative proteomics in the analysis of tears in dry eye patients.

Authors:  Sruthi Srinivasan; Mirunalni Thangavelu; Liwen Zhang; Kari B Green; Kelly K Nichols
Journal:  Invest Ophthalmol Vis Sci       Date:  2012-07-31       Impact factor: 4.799

3.  Bead Based Multiplex Assay for Analysis of Tear Cytokine Profiles.

Authors:  Praveen Kumar Balne; Veonice Bijin Au; Louis Tong; Arkasubhra Ghosh; Mukesh Agrawal; John Connolly; Rupesh Agrawal
Journal:  J Vis Exp       Date:  2017-10-13       Impact factor: 1.355

4.  Lacrimal proline rich 4 (LPRR4) protein in the tear fluid is a potential biomarker of dry eye syndrome.

Authors:  Saijyothi Venkata Aluru; Shweta Agarwal; Bhaskar Srinivasan; Geetha Krishnan Iyer; Sivakumar M Rajappa; Utpal Tatu; Prema Padmanabhan; Nirmala Subramanian; Angayarkanni Narayanasamy
Journal:  PLoS One       Date:  2012-12-18       Impact factor: 3.240

5.  Ocular Surface as Barrier of Innate Immunity.

Authors:  Rodrigo Bolaños-Jiménez; Alejandro Navas; Erika Paulina López-Lizárraga; Francesc March de Ribot; Alexandra Peña; Enrique O Graue-Hernández; Yonathan Garfias
Journal:  Open Ophthalmol J       Date:  2015-05-15

Review 6.  Proteomics in India: the clinical aspect.

Authors:  Somaditya Mukherjee; Arun Bandyopadhyay
Journal:  Clin Proteomics       Date:  2016-11-05       Impact factor: 3.988

7.  Proteomics analysis of human tears from aqueous-deficient and evaporative dry eye patients.

Authors:  Natarajan Perumal; Sebastian Funke; Norbert Pfeiffer; Franz H Grus
Journal:  Sci Rep       Date:  2016-07-20       Impact factor: 4.379

8.  Pathogen induced changes in the protein profile of human tears from Fusarium keratitis patients.

Authors:  Sivagnanam Ananthi; Namperumalsamy Venkatesh Prajna; Prajna Lalitha; Murugesan Valarnila; Kuppamuthu Dharmalingam
Journal:  PLoS One       Date:  2013-01-08       Impact factor: 3.240

9.  Analysis of tear inflammatory mediators: A comparison between the microarray and Luminex methods.

Authors:  Karen Dionne; Rachel L Redfern; Jason J Nichols; Kelly K Nichols
Journal:  Mol Vis       Date:  2016-02-23       Impact factor: 2.367

Review 10.  Practical issues concerning tear protein assays in dry eye.

Authors:  Sharon D'Souza; Louis Tong
Journal:  Eye Vis (Lond)       Date:  2014-11-13
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