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Literature DB >> 20882112

Highly Precise Shape Mimicry by a Difluorotoluene Deoxynucleoside, a Replication-Competent Substitute for Thymidine.

Kevin M Guckian¹, Eric T Kool.

Abstract

Entities: Chemical

Year: 1997 PMID： 20882112 PMCID： PMC2946115 DOI： 10.1002/anie.199728251

Source DB: PubMed Journal: Angew Chem Int Ed Engl ISSN： 1433-7851 Impact factor: 15.336

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12 in total

1. Difluorotoluene, a Nonpolar Isostere for Thymine, Codes Specifically and Efficiently for Adenine in DNA Replication.

Authors: Sean Moran; Rex X-F Ren; Squire Rumney; Eric T Kool
Journal: J Am Chem Soc Date: 1997-02-26 Impact factor: 15.419

2. Synthesis and properties of oligonucleotides containing 2'-deoxynebularine and 2'-deoxyxanthosine.

Authors: R Eritja; D M Horowitz; P A Walker; J P Ziehler-Martin; M S Boosalis; M F Goodman; K Itakura; B E Kaplan
Journal: Nucleic Acids Res Date: 1986-10-24 Impact factor: 16.971

3. Fluorescence studies of nucleotides and polynucleotides. II. 7-Deazanebularin: coding ambiguity in transcription with base pairs containing fewer than two hydrogen bonds.

Authors: D C Ward; E Reich
Journal: J Biol Chem Date: 1972-02-10 Impact factor: 5.157

Review 4. Biochemical basis of DNA replication fidelity.

Authors: M F Goodman; S Creighton; L B Bloom; J Petruska
Journal: Crit Rev Biochem Mol Biol Date: 1993 Impact factor: 8.250

Review 5. Fidelity of DNA synthesis.

Authors: L A Loeb; T A Kunkel
Journal: Annu Rev Biochem Date: 1982 Impact factor: 23.643

6. A thymidine triphosphate shape analog lacking Watson-Crick pairing ability is replicated with high sequence selectivity.

Authors: S Moran; R X Ren; E T Kool
Journal: Proc Natl Acad Sci U S A Date: 1997-09-30 Impact factor: 11.205

7. Hydrophobic, Non-Hydrogen-Bonding Bases and Base Pairs in DNA.

Authors: Barbara A Schweitzer; Eric T Kool
Journal: J Am Chem Soc Date: 1995-02-22 Impact factor: 15.419

8. Aromatic Nonpolar Nucleosides as Hydrophobic Isosteres of Pyrimidine and Purine Nucleosides.

Authors: Barbara A Schweitzer; Eric T Kool
Journal: J Org Chem Date: 1994-12-01 Impact factor: 4.354

9. Conformational analysis of the deoxyribofuranose ring in DNA by means of sums of proton-proton coupling constants: a graphical method.

Authors: L J Rinkel; C Altona
Journal: J Biomol Struct Dyn Date: 1987-02

10. Insertion of specific bases during DNA synthesis past the oxidation-damaged base 8-oxodG.

Authors: S Shibutani; M Takeshita; A P Grollman
Journal: Nature Date: 1991-01-31 Impact factor: 49.962

16 in total

1. High-fidelity in vivo replication of DNA base shape mimics without Watson-Crick hydrogen bonds.

Authors: James C Delaney; Paul T Henderson; Sandra A Helquist; Juan C Morales; John M Essigmann; Eric T Kool
Journal: Proc Natl Acad Sci U S A Date: 2003-04-03 Impact factor: 11.205

2. Discrimination among individual Watson-Crick base pairs at the termini of single DNA hairpin molecules.

Authors: Wenonah A Vercoutere; Stephen Winters-Hilt; Veronica S DeGuzman; David Deamer; Sam E Ridino; Joseph T Rodgers; Hugh E Olsen; Andre Marziali; Mark Akeson
Journal: Nucleic Acids Res Date: 2003-02-15 Impact factor: 16.971

3. Minor Groove Interactions between Polymerase and DNA: More Essential to Replication than Watson-Crick Hydrogen Bonds?

Authors: Juan C Morales; Eric T Kool
Journal: J Am Chem Soc Date: 1999-02-14 Impact factor: 15.419

4. Measurement and theory of hydrogen bonding contribution to isosteric DNA base pairs.

Authors: Omid Khakshoor; Steven E Wheeler; K N Houk; Eric T Kool
Journal: J Am Chem Soc Date: 2012-02-02 Impact factor: 15.419

5. Structural basis for differential insertion kinetics of dNMPs opposite a difluorotoluene nucleotide residue.

Authors: Shuangluo Xia; Soo Hyun Eom; William H Konigsberg; Jimin Wang
Journal: Biochemistry Date: 2012-02-08 Impact factor: 3.162

6. Probing the active site steric flexibility of HIV-1 reverse transcriptase: different constraints for DNA- versus RNA-templated synthesis.

Authors: Adam P Silverman; Scott J Garforth; Vinayaka R Prasad; Eric T Kool
Journal: Biochemistry Date: 2008-03-27 Impact factor: 3.162