Literature DB >> 20879329

A generalized learning based framework for fast brain image registration.

Minjeong Kim1, Guorong Wu, Pew-Thian Yap, Dinggang Shen.   

Abstract

This paper presents a generalized learning based framework for improving both speed and accuracy of the existing deformable registration method. The key of our framework involves the utilization of a support vector regression (SVR) to learn the correlation between brain image appearances and their corresponding shape deformations to a template, for helping significantly cut down the computation cost and improve the robustness to local minima by using the learned correlation to instantly predict a good subject-specific deformation initialization for any given subject under registration. Our framework consists of three major parts: 1) training of SVR models based on the statistics of image samples and their shape deformations to capture intrinsic image-deformation correlations, 2) deformation prediction for a new subject with the trained SVR models to generate a subject-resemblance intermediate template by warping the original template with the predicted deformations, and 3) estimating of the residual deformation from the intermediate template to the subject for refined registration. Any existing deformable registration methods can be easily employed for training the SVR models and estimating the residual deformation. We have tested in this paper the two widely used deformable registration algorithms, i.e., HAMMER] and diffeomorphic demons, for demonstration of our proposed frameowrk. Experimental results show that, compared to the registration using the original methods (with no deformation prediction), our framework achieves a significant speedup (6X faster than HAMMER, and 3X faster than diffeomorphic demons), while maintaining comparable (or even slighly better) registration accuracy.

Entities:  

Mesh:

Year:  2010        PMID: 20879329      PMCID: PMC3021962          DOI: 10.1007/978-3-642-15745-5_38

Source DB:  PubMed          Journal:  Med Image Comput Comput Assist Interv


  7 in total

1.  HAMMER: hierarchical attribute matching mechanism for elastic registration.

Authors:  Dinggang Shen; Christos Davatzikos
Journal:  IEEE Trans Med Imaging       Date:  2002-11       Impact factor: 10.048

2.  Automatic construction of 3-D statistical deformation models of the brain using nonrigid registration.

Authors:  Daniel Rueckert; Alejandro F Frangi; Julia A Schnabel
Journal:  IEEE Trans Med Imaging       Date:  2003-08       Impact factor: 10.048

3.  Non-rigid image registration using a statistical spline deformation model.

Authors:  Dirk Loeckx; Frederik Maes; Dirk Vandermeulen; Paul Suetens
Journal:  Inf Process Med Imaging       Date:  2003-07

4.  Statistical representation of high-dimensional deformation fields with application to statistically constrained 3D warping.

Authors:  Zhong Xue; Dinggang Shen; Christos Davatzikos
Journal:  Med Image Anal       Date:  2006-08-02       Impact factor: 8.545

5.  Diffeomorphic demons: efficient non-parametric image registration.

Authors:  Tom Vercauteren; Xavier Pennec; Aymeric Perchant; Nicholas Ayache
Journal:  Neuroimage       Date:  2008-11-07       Impact factor: 6.556

6.  Open Access Series of Imaging Studies (OASIS): cross-sectional MRI data in young, middle aged, nondemented, and demented older adults.

Authors:  Daniel S Marcus; Tracy H Wang; Jamie Parker; John G Csernansky; John C Morris; Randy L Buckner
Journal:  J Cogn Neurosci       Date:  2007-09       Impact factor: 3.225

7.  RABBIT: rapid alignment of brains by building intermediate templates.

Authors:  Songyuan Tang; Yong Fan; Guorong Wu; Minjeong Kim; Dinggang Shen
Journal:  Neuroimage       Date:  2009-03-10       Impact factor: 6.556

  7 in total
  3 in total

1.  Directed graph based image registration.

Authors:  Hongjun Jia; Guorong Wu; Qian Wang; Yaping Wang; Minjeong Kim; Dinggang Shen
Journal:  Comput Med Imaging Graph       Date:  2011-10-19       Impact factor: 4.790

2.  SharpMean: groupwise registration guided by sharp mean image and tree-based registration.

Authors:  Guorong Wu; Hongjun Jia; Qian Wang; Dinggang Shen
Journal:  Neuroimage       Date:  2011-04-02       Impact factor: 6.556

3.  Iterative multi-atlas-based multi-image segmentation with tree-based registration.

Authors:  Hongjun Jia; Pew-Thian Yap; Dinggang Shen
Journal:  Neuroimage       Date:  2011-07-23       Impact factor: 6.556

  3 in total

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