Literature DB >> 20870769

Stability and instability in the lysogenic state of phage lambda.

John W Little1, Christine B Michalowski.   

Abstract

Complex gene regulatory circuits exhibit emergent properties that are difficult to predict from the behavior of the components. One such property is the stability of regulatory states. Here we analyze the stability of the lysogenic state of phage λ. In this state, the virus maintains a stable association with the host, and the lytic functions of the virus are repressed by the viral CI repressor. This state readily switches to the lytic pathway when the host SOS system is induced. A low level of SOS-dependent switching occurs without an overt stimulus. We found that the intrinsic rate of switching to the lytic pathway, measured in a host lacking the SOS response, was almost undetectably low, probably less than 10(-8)/generation. We surmise that this low rate has not been selected directly during evolution but results from optimizing the rate of switching in a wild-type host over the natural range of SOS-inducing conditions. We also analyzed a mutant, λprm240, in which the promoter controlling CI expression was weakened, rendering lysogens unstable. Strikingly, the intrinsic stability of λprm240 lysogens depended markedly on the growth conditions; lysogens grown in minimal medium were nearly stable but switched at high rates when grown in rich medium. These effects on stability likely reflect corresponding effects on the strength of the prm240 promoter, measured in an uncoupled assay system. Several derivatives of λprm240 with altered stabilities were characterized. This mutant and its derivatives afford a model system for further analysis of stability.

Entities:  

Mesh:

Substances:

Year:  2010        PMID: 20870769      PMCID: PMC2976446          DOI: 10.1128/JB.00726-10

Source DB:  PubMed          Journal:  J Bacteriol        ISSN: 0021-9193            Impact factor:   3.490


  61 in total

1.  The importance of repairing stalled replication forks.

Authors:  M M Cox; M F Goodman; K N Kreuzer; D J Sherratt; S J Sandler; K J Marians
Journal:  Nature       Date:  2000-03-02       Impact factor: 49.962

2.  Octamerization of lambda CI repressor is needed for effective repression of P(RM) and efficient switching from lysogeny.

Authors:  I B Dodd; A J Perkins; D Tsemitsidis; J B Egan
Journal:  Genes Dev       Date:  2001-11-15       Impact factor: 11.361

3.  A genetic study of the temperate coliphage.

Authors:  A D KAISER
Journal:  Virology       Date:  1955-11       Impact factor: 3.616

4.  Dynamics of Escherichia coli chromosome segregation during multifork replication.

Authors:  Henrik J Nielsen; Brenda Youngren; Flemming G Hansen; Stuart Austin
Journal:  J Bacteriol       Date:  2007-09-28       Impact factor: 3.490

5.  A simplified model for lysogenic regulation through DNA looping.

Authors:  L Meadow Anderson; Haw Yang
Journal:  Conf Proc IEEE Eng Med Biol Soc       Date:  2008

6.  The essential role of the cro gene in lytic development by bacteriophage lambda.

Authors:  A Folkmanis; W Maltzman; P Mellon; A Skalka; H Echols
Journal:  Virology       Date:  1977-09       Impact factor: 3.616

7.  Lambda repressor recognizes the approximately 2-fold symmetric half-operator sequences asymmetrically.

Authors:  A Sarai; Y Takeda
Journal:  Proc Natl Acad Sci U S A       Date:  1989-09       Impact factor: 11.205

8.  Involvement of recombination genes in growth and viability of Escherichia coli K-12.

Authors:  F Capaldo-Kimball; S D Barbour
Journal:  J Bacteriol       Date:  1971-04       Impact factor: 3.490

9.  Analysis of the sequence-specific interactions between Cro repressor and operator DNA by systematic base substitution experiments.

Authors:  Y Takeda; A Sarai; V M Rivera
Journal:  Proc Natl Acad Sci U S A       Date:  1989-01       Impact factor: 11.205

10.  Specificity determinants for the interaction of lambda repressor and P22 repressor dimers.

Authors:  F W Whipple; N H Kuldell; L A Cheatham; A Hochschild
Journal:  Genes Dev       Date:  1994-05-15       Impact factor: 11.361

View more
  25 in total

1.  Effect of supercoiling on the λ switch.

Authors:  Kamilla Norregaard; Magnus Andersson; Kim Sneppen; Peter Eigil Nielsen; Stanley Brown; Lene B Oddershede
Journal:  Bacteriophage       Date:  2014-01-01

2.  Role of cis-acting sites in stimulation of the phage λ P(RM) promoter by CI-mediated looping.

Authors:  Christine B Michalowski; John W Little
Journal:  J Bacteriol       Date:  2013-05-24       Impact factor: 3.490

3.  Bacteriophage lambda repressor mediates the formation of a complex enhancer-like structure.

Authors:  Lun Cui; Iain Murchland; Ian B Dodd; Keith E Shearwin
Journal:  Transcription       Date:  2013 Sep-Dec

4.  DNA supercoiling enhances cooperativity and efficiency of an epigenetic switch.

Authors:  Kamilla Norregaard; Magnus Andersson; Kim Sneppen; Peter Eigil Nielsen; Stanley Brown; Lene B Oddershede
Journal:  Proc Natl Acad Sci U S A       Date:  2013-10-07       Impact factor: 11.205

5.  Multilevel autoregulation of λ repressor protein CI by DNA looping in vitro.

Authors:  Dale Lewis; Phuoc Le; Chiara Zurla; Laura Finzi; Sankar Adhya
Journal:  Proc Natl Acad Sci U S A       Date:  2011-08-22       Impact factor: 11.205

Review 6.  Impact of spontaneous prophage induction on the fitness of bacterial populations and host-microbe interactions.

Authors:  Arun M Nanda; Kai Thormann; Julia Frunzke
Journal:  J Bacteriol       Date:  2014-11-17       Impact factor: 3.490

Review 7.  Supercoiling biases the formation of loops involved in gene regulation.

Authors:  Laura Finzi; David Dunlap
Journal:  Biophys Rev       Date:  2016-07-05

8.  Enhancer-like long-range transcriptional activation by λ CI-mediated DNA looping.

Authors:  Lun Cui; Iain Murchland; Keith E Shearwin; Ian B Dodd
Journal:  Proc Natl Acad Sci U S A       Date:  2013-02-04       Impact factor: 11.205

9.  Phage and bacteria support mutual diversity in a narrowing staircase of coexistence.

Authors:  Jan O Haerter; Namiko Mitarai; Kim Sneppen
Journal:  ISME J       Date:  2014-05-23       Impact factor: 10.302

10.  Optimality of the spontaneous prophage induction rate.

Authors:  Michael G Cortes; Jonathan Krog; Gábor Balázsi
Journal:  J Theor Biol       Date:  2019-09-13       Impact factor: 2.691

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.