Literature DB >> 20867481

Post-transcriptional regulation of noise in protein distributions during gene expression.

Tao Jia1, Rahul V Kulkarni.   

Abstract

The intrinsic stochasticity of gene expression can lead to a large variability of protein levels across a population of cells. Variability (or noise) in protein distributions can be modulated by cellular mechanisms of gene regulation; in particular, there is considerable interest in understanding the role of post-transcriptional regulation. To address this issue, we propose and analyze a stochastic model for post-transcriptional regulation of gene expression. The analytical solution of the model provides insight into the effects of different mechanisms of post-transcriptional regulation on the noise in protein distributions. The results obtained also demonstrate how different sources of intrinsic noise in gene expression can be discriminated based on observations of regulated protein distributions.

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Year:  2010        PMID: 20867481     DOI: 10.1103/PhysRevLett.105.018101

Source DB:  PubMed          Journal:  Phys Rev Lett        ISSN: 0031-9007            Impact factor:   9.161


  5 in total

1.  Stochastic gene expression conditioned on large deviations.

Authors:  Jordan M Horowitz; Rahul V Kulkarni
Journal:  Phys Biol       Date:  2017-05-23       Impact factor: 2.583

2.  Distribution of Initiation Times Reveals Mechanisms of Transcriptional Regulation in Single Cells.

Authors:  Sandeep Choubey; Jane Kondev; Alvaro Sanchez
Journal:  Biophys J       Date:  2018-05-08       Impact factor: 4.033

3.  Probing Mechanisms of Transcription Elongation Through Cell-to-Cell Variability of RNA Polymerase.

Authors:  Md Zulfikar Ali; Sandeep Choubey; Dipjyoti Das; Robert C Brewster
Journal:  Biophys J       Date:  2020-02-12       Impact factor: 4.033

4.  Mathematical modeling of combinatorial regulation suggests that apparent positive regulation of targets by miRNA could be an artifact resulting from competition for mRNA.

Authors:  Dimpal Nyayanit; Chetan J Gadgil
Journal:  RNA       Date:  2015-01-09       Impact factor: 4.942

5.  Effects of post-transcriptional regulation on phenotypic noise in Escherichia coli.

Authors:  Rinat Arbel-Goren; Asaf Tal; Tamar Friedlander; Shiri Meshner; Nina Costantino; Donald L Court; Joel Stavans
Journal:  Nucleic Acids Res       Date:  2013-03-21       Impact factor: 16.971

  5 in total

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