Literature DB >> 20866273

Thermodynamics of nanospheres encapsulated in virus capsids.

Antonio Siber1, Roya Zandi, Rudolf Podgornik.   

Abstract

We investigate the thermodynamics of complexation of functionalized charged nanospheres with viral proteins. The physics of this problem is governed not only by electrostatic interaction between the proteins and the nanosphere cores (screened by salt ions), but also by configurational degrees of freedom of the charged protein N tails. We approach the problem by constructing an appropriate complexation free-energy functional. On the basis of both numerical and analytical studies of this functional we construct the phase diagram for the assembly which contains the information on the assembled structures that appear in the thermodynamical equilibrium, depending on the size and surface charge density of the nanosphere cores. We show that both the nanosphere core charge and its radius determine the size of the capsid that forms around the core.

Entities:  

Mesh:

Substances:

Year:  2010        PMID: 20866273     DOI: 10.1103/PhysRevE.81.051919

Source DB:  PubMed          Journal:  Phys Rev E Stat Nonlin Soft Matter Phys        ISSN: 1539-3755


  19 in total

1.  The Robust Assembly of Small Symmetric Nanoshells.

Authors:  Jef Wagner; Roya Zandi
Journal:  Biophys J       Date:  2015-09-01       Impact factor: 4.033

2.  Modeling Viral Capsid Assembly.

Authors:  Michael F Hagan
Journal:  Adv Chem Phys       Date:  2014       Impact factor: 1.000

3.  Photonics and plasmonics go viral: self-assembly of hierarchical metamaterials.

Authors:  Amy M Wen; Rudolf Podgornik; Giuseppe Strangi; Nicole F Steinmetz
Journal:  Rend Lincei Sci Fis Nat       Date:  2015-03-05       Impact factor: 1.627

4.  To build a virus on a nucleic acid substrate.

Authors:  Adam Zlotnick; J Zachary Porterfield; Joseph Che-Yen Wang
Journal:  Biophys J       Date:  2013-04-02       Impact factor: 4.033

5.  Hepatitis virus capsid polymorph stability depends on encapsulated cargo size.

Authors:  Li He; Zachary Porterfield; Paul van der Schoot; Adam Zlotnick; Bogdan Dragnea
Journal:  ACS Nano       Date:  2013-09-30       Impact factor: 15.881

6.  How simple can a model of an empty viral capsid be? Charge distributions in viral capsids.

Authors:  Anže Lošdorfer Božič; Antonio Siber; Rudolf Podgornik
Journal:  J Biol Phys       Date:  2012-09-06       Impact factor: 1.365

7.  Using Markov state models to study self-assembly.

Authors:  Matthew R Perkett; Michael F Hagan
Journal:  J Chem Phys       Date:  2014-06-07       Impact factor: 3.488

8.  Role of surface charge density in nanoparticle-templated assembly of bromovirus protein cages.

Authors:  Marie-Christine Daniel; Irina B Tsvetkova; Zachary T Quinkert; Ayaluru Murali; Mrinmoy De; Vincent M Rotello; C Cheng Kao; Bogdan Dragnea
Journal:  ACS Nano       Date:  2010-07-27       Impact factor: 15.881

9.  Impact of the topology of viral RNAs on their encapsulation by virus coat proteins.

Authors:  Paul van der Schoot; Roya Zandi
Journal:  J Biol Phys       Date:  2013-03-14       Impact factor: 1.365

10.  Pathways for virus assembly around nucleic acids.

Authors:  Jason D Perlmutter; Matthew R Perkett; Michael F Hagan
Journal:  J Mol Biol       Date:  2014-07-16       Impact factor: 5.469

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.