Literature DB >> 20865555

Computational energetic model of morphogenesis based on multi-agent Cellular Potts Model.

Sébastien Tripodi1, Pascal Ballet, Vincent Rodin.   

Abstract

The Cellular Potts Model (CPM) is a cellular automaton (CA), developed by Glazier and Graner in 1992, to model the morphogenesis. In this model, the entities are the cells. It has already been improved in many ways; however, a key point in biological systems, not defined in CPM, is energetic exchange between entities. We integrate this energetic concept inside the CPM. We simulate a cell differentiation inside a growing cell tissue. The results are the emergence of dynamic patterns coming from the consumption and production of energy. A model described by CA is less scalable than one described by a multi-agent system (MAS). We have developed a MAS based on the CPM, where a cell agent is implemented from the cell of CPM together with several behaviours, in particular the consumption and production of energy from the consumption of molecules.

Mesh:

Year:  2010        PMID: 20865555     DOI: 10.1007/978-1-4419-5913-3_76

Source DB:  PubMed          Journal:  Adv Exp Med Biol        ISSN: 0065-2598            Impact factor:   2.622


  3 in total

1.  A checkpoint-oriented cell cycle simulation model.

Authors:  David Bernard; Odile Mondesert; Aurélie Gomes; Yves Duthen; Valérie Lobjois; Sylvain Cussat-Blanc; Bernard Ducommun
Journal:  Cell Cycle       Date:  2019-04-04       Impact factor: 4.534

2.  Modeling evolutionary dynamics of epigenetic mutations in hierarchically organized tumors.

Authors:  Andrea Sottoriva; Louis Vermeulen; Simon Tavaré
Journal:  PLoS Comput Biol       Date:  2011-05-05       Impact factor: 4.475

3.  Cellular potts modeling of tumor growth, tumor invasion, and tumor evolution.

Authors:  András Szabó; Roeland M H Merks
Journal:  Front Oncol       Date:  2013-04-16       Impact factor: 6.244

  3 in total

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