| Literature DB >> 20849594 |
Sebastian Klaus1, Christoph D Schubart, Bruno Streit, Markus Pfenninger.
Abstract
BACKGROUND: The faunal and floral relationship of northward-drifting India with its neighboring continents is of general biogeographic interest as an important driver of regional biodiversity. However, direct biogeographic connectivity of India and Southeast Asia during the Cenozoic remains largely unexplored. We investigate timing, direction and mechanisms of faunal exchange between India and Southeast Asia, based on a molecular phylogeny, molecular clock-derived time estimates and biogeographic reconstructions of the Asian freshwater crab family Gecarcinucidae.Entities:
Mesh:
Year: 2010 PMID: 20849594 PMCID: PMC2949875 DOI: 10.1186/1471-2148-10-287
Source DB: PubMed Journal: BMC Evol Biol ISSN: 1471-2148 Impact factor: 3.260
Figure 1Eocene position of India. Relative position of the Indian and Southeast Asian continental plates during the Middle Eocene (45 Ma) according to Ali and Aitchison [17], with the position of Southeast Asia based on Hall [68], and the distribution of land and sea after Smith et al. [69]. A: based on the motion path of the Indian Subcontinent of Acton [19]. B: based on the motion path of Schettino and Scotese [18].
Figure 2Phylogeny of the Gecarcinucidae. Maximum clade credibility tree of the Gecarcinucidae based on Bayesian inference of 16 S rDNA and histone H3 sequences. At nodes both the posterior probabilities (> 0.90) of the Bayesian analysis and the bootstrap values (> 50) of the maximum likelihood analysis are given. Hexagons indicate the three fossil calibration points (see text), time estimates in square brackets represent the 95% confidence interval. Range inheritance as reconstructed by Lagrange is visualized by letters in colored squares, in the case of alternative reconstructions within two log-likelihood units the relative probability of the better reconstruction is added in a square box. Ancestral area reconstruction by BayesTraits is represented by pie charts with the ranges color-coded as for the Lagrange analysis.
Testing of temporal models
| ln [post. prob.] ± SE | Para 45 | Para 35 | Para 25 | Para 45 | Para 35 | Para 35 | Para 25 | |
|---|---|---|---|---|---|---|---|---|
| Para 45 Liot 45 | -14285.01 ± 0.19 | - | 0.95* | 1.73*** | 0.66* | 1.24** | 2.74*** | 1.34** |
| Para 35 Liot 35 | -14287.19 ± 0.15 | -0,95 | - | 0.78* | 0.78* | 0.29 | 1.80*** | 0.39 |
| Para 25 Liot 25 | -14288.99 ± 0.17 | -1.73 | -0.78 | - | -1.06 | -0.49 | 1.02** | -0.39 |
| Para 45 Liot 35 | -14286.54 ± 0.16 | -0.66 | -0.78 | 1.06** | - | 0.58* | 2.08*** | 0.67* |
| Para 35 Liot 45 | -14287.86 ± 0.17 | -1.24 | -0.29 | 0.49* | -0.58 | - | 1.51*** | 0.10 |
| Para 35 Liot 25 | -14291.33 ± 0.15 | -2.74 | -1.80 | -1.02 | -2.08 | -1.51 | - | -1.41 |
| Para 25 Liot 35 | -14288.09 ± 0.17 | -1.34 | -0.39 | 0.39 | -0.67 | -0.10 | 1.41** | - |
Testing of the temporal models with different time constraints in million years for the most recent common ancestor (MRCA) for the subfamilies Parathelphusinae (Para) and Liotelphusinae (Liot). The first three models (first row) constrain the age of both MRCAs before, during and after the assumed final collision of India and Eurasia; the next four models assume different ages for the MRCA of Parathelphusinae and Liotelphusinae, i.e., either before or during collision of plates, or during and after this event. The natural logarithm of the models posterior probabilities and its standard error, and the common logarithm of the Bayes factor between models are given. Models in the left column are tested against the models in the first row (* substantial, ** strong, *** very strong support for one model over another). The first model, constraining the MRCA of both subfamilies into the Middle Eocene (45 Ma), i.e., before the final Indian-Eurasian collision, is superior to all other models.
Testing of dispersal models
| Model | log likelihood | AIC | |
|---|---|---|---|
| H | -48.88 | 111.76 | 0.975 |
| H | -50.51 | 115.20 | 0.019 |
| H0 | -50.09 | 116.18 | 0.006 |
Different dispersal models for the Gecarcinucidae that were tested in Lagrange to investigate the direction of faunal exchange between India and Southeast Asia. Given are the global maximum likelihood at the root node, the AIC, and the Akaike weight (w) of the respective dispersal models. The H0 model is without any dispersal constraint, Honly allows dispersal from India to Southeast Asia, Honly from Southeast Asia to India.
Figure 3Sampling of gecarcinucid species. Map showing the sampling sites of the here included specimens, coloured according to the area encoding of the biogeographic analyses (yellow: India; red: Southeast Asia; green: Philippines; blue: Wallacea, New Guinea, Australia). Numbers correspond to the numbering of specimens in Fig. 2. For five specimens, originating from older collections or from the aquarium trade, only approximate locations are known, and thus are not shown here.