Literature DB >> 20844018

A functional genomic screen in planarians identifies novel regulators of germ cell development.

Yuying Wang1, Joel M Stary, James E Wilhelm, Phillip A Newmark.   

Abstract

Germ cells serve as intriguing examples of differentiated cells that retain the capacity to generate all cell types of an organism. Here we used functional genomic approaches in planarians to identify genes required for proper germ cell development. We conducted microarray analyses and in situ hybridization to discover and validate germ cell-enriched transcripts, and then used RNAi to screen for genes required for discrete stages of germ cell development. The majority of genes we identified encode conserved RNA-binding proteins, several of which have not been implicated previously in germ cell development. We also show that a germ cell-specific subunit of the conserved transcription factor CCAAT-binding protein/nuclear factor-Y is required for maintaining spermatogonial stem cells. Our results demonstrate that conserved transcriptional and post-transcriptional mechanisms regulate germ cell development in planarians. These findings suggest that studies of planarians will inform our understanding of germ cell biology in higher organisms.

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Year:  2010        PMID: 20844018      PMCID: PMC2939369          DOI: 10.1101/gad.1951010

Source DB:  PubMed          Journal:  Genes Dev        ISSN: 0890-9369            Impact factor:   11.361


  79 in total

1.  Broad phylogenomic sampling improves resolution of the animal tree of life.

Authors:  Casey W Dunn; Andreas Hejnol; David Q Matus; Kevin Pang; William E Browne; Stephen A Smith; Elaine Seaver; Greg W Rouse; Matthias Obst; Gregory D Edgecombe; Martin V Sørensen; Steven H D Haddock; Andreas Schmidt-Rhaesa; Akiko Okusu; Reinhardt Møbjerg Kristensen; Ward C Wheeler; Mark Q Martindale; Gonzalo Giribet
Journal:  Nature       Date:  2008-03-05       Impact factor: 49.962

Review 2.  The molecular machinery of germ line specification.

Authors:  Ben Ewen-Campen; Evelyn E Schwager; Cassandra G M Extavour
Journal:  Mol Reprod Dev       Date:  2010-01       Impact factor: 2.609

3.  Conserved role of nanos proteins in germ cell development.

Authors:  Masayuki Tsuda; Yumiko Sasaoka; Makoto Kiso; Kuniya Abe; Seiki Haraguchi; Satoru Kobayashi; Yumiko Saga
Journal:  Science       Date:  2003-08-29       Impact factor: 47.728

4.  Essential role of Plzf in maintenance of spermatogonial stem cells.

Authors:  José A Costoya; Robin M Hobbs; Maria Barna; Giorgio Cattoretti; Katia Manova; Meena Sukhwani; Kyle E Orwig; Debra J Wolgemuth; Pier Paolo Pandolfi
Journal:  Nat Genet       Date:  2004-05-23       Impact factor: 38.330

5.  Plzf is required in adult male germ cells for stem cell self-renewal.

Authors:  F William Buaas; Andrew L Kirsh; Manju Sharma; Derek J McLean; Jamie L Morris; Michael D Griswold; Dirk G de Rooij; Robert E Braun
Journal:  Nat Genet       Date:  2004-05-23       Impact factor: 38.330

Review 6.  Germ cell specification and regeneration in planarians.

Authors:  P A Newmark; Y Wang; T Chong
Journal:  Cold Spring Harb Symp Quant Biol       Date:  2008-11-06

7.  Characterization of two cytoplasmic poly(A)-binding proteins, PABPC1 and PABPC2, in mouse spermatogenic cells.

Authors:  Masanori Kimura; Kazuyuki Ishida; Shin-ichi Kashiwabara; Tadashi Baba
Journal:  Biol Reprod       Date:  2008-11-19       Impact factor: 4.285

8.  Formaldehyde-based whole-mount in situ hybridization method for planarians.

Authors:  Bret J Pearson; George T Eisenhoffer; Kyle A Gurley; Jochen C Rink; Diane E Miller; Alejandro Sánchez Alvarado
Journal:  Dev Dyn       Date:  2009-02       Impact factor: 3.780

9.  The cis-acting RNA trafficking signal from myelin basic protein mRNA and its cognate trans-acting ligand hnRNP A2 enhance cap-dependent translation.

Authors:  S Kwon; E Barbarese; J H Carson
Journal:  J Cell Biol       Date:  1999-10-18       Impact factor: 10.539

10.  Systematic identification of cis-regulatory sequences active in mouse and human embryonic stem cells.

Authors:  Marica Grskovic; Christina Chaivorapol; Alexandre Gaspar-Maia; Hao Li; Miguel Ramalho-Santos
Journal:  PLoS Genet       Date:  2007-08       Impact factor: 5.917

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  56 in total

1.  PRMT5 and the role of symmetrical dimethylarginine in chromatoid bodies of planarian stem cells.

Authors:  Labib Rouhana; Ana P Vieira; Rachel H Roberts-Galbraith; Phillip A Newmark
Journal:  Development       Date:  2012-02-08       Impact factor: 6.868

2.  Glycolytic enzymes localize to ribonucleoprotein granules in Drosophila germ cells, bind Tudor and protect from transposable elements.

Authors:  Ming Gao; Travis C Thomson; T Michael Creed; Shikui Tu; Sudan N Loganathan; Christina A Jackson; Patrick McCluskey; Yanyan Lin; Scott E Collier; Zhiping Weng; Paul Lasko; Melanie D Ohi; Alexey L Arkov
Journal:  EMBO Rep       Date:  2015-01-18       Impact factor: 8.807

3.  PIWI homologs mediate histone H4 mRNA localization to planarian chromatoid bodies.

Authors:  Labib Rouhana; Jennifer A Weiss; Ryan S King; Phillip A Newmark
Journal:  Development       Date:  2014-06-05       Impact factor: 6.868

4.  SmedGD 2.0: The Schmidtea mediterranea genome database.

Authors:  Sofia M C Robb; Kirsten Gotting; Eric Ross; Alejandro Sánchez Alvarado
Journal:  Genesis       Date:  2015-07-17       Impact factor: 2.487

Review 5.  The history and enduring contributions of planarians to the study of animal regeneration.

Authors:  Sarah A Elliott; Alejandro Sánchez Alvarado
Journal:  Wiley Interdiscip Rev Dev Biol       Date:  2012-07-23       Impact factor: 5.814

6.  Genetic expansion of chaperonin-containing TCP-1 (CCT/TRiC) complex subunits yields testis-specific isoforms required for spermatogenesis in planarian flatworms.

Authors:  Jenna T Counts; Tasha M Hester; Labib Rouhana
Journal:  Mol Reprod Dev       Date:  2017-11-10       Impact factor: 2.609

7.  Molecular characterization and expression profile of nanos in Schistosoma japonicum and its influence on the expression several mammalian stem cell factors.

Authors:  Bikash Ranjan Giri; Xiaoli Du; Tianqi Xia; Yongjun Chen; Hao Li; Guofeng Cheng
Journal:  Parasitol Res       Date:  2017-05-30       Impact factor: 2.289

8.  Gene expression of pluripotency determinants is conserved between mammalian and planarian stem cells.

Authors:  Pinar Onal; Dominic Grün; Catherine Adamidi; Agnieszka Rybak; Jordi Solana; Guido Mastrobuoni; Yongbo Wang; Hans-Peter Rahn; Wei Chen; Stefan Kempa; Ulrike Ziebold; Nikolaus Rajewsky
Journal:  EMBO J       Date:  2012-04-27       Impact factor: 11.598

Review 9.  Regeneration Genetics.

Authors:  Chen-Hui Chen; Kenneth D Poss
Journal:  Annu Rev Genet       Date:  2017-08-30       Impact factor: 16.830

10.  A premeiotic function for boule in the planarian Schmidtea mediterranea.

Authors:  Harini Iyer; Melanie Issigonis; Prashant P Sharma; Cassandra G Extavour; Phillip A Newmark
Journal:  Proc Natl Acad Sci U S A       Date:  2016-06-02       Impact factor: 11.205

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