Literature DB >> 20841923

Validation of experimental charge densities: refinement of the macrolide antibiotic roxithromycin.

J J Holstein1, P Luger, R Kalinowski, S Mebs, C Paulman, B Dittrich.   

Abstract

Multipole refinements of larger organic molecules have so far been limited to a few exceptional cases. We report an investigation of the detailed experimental electron-density distribution (EDD) of roxithromycin, a macrolide antibiotic consisting of 134 atoms. Although the experimental multipole refinement on high-resolution synchrotron data converged smoothly, validation of the electron density by calculation of an `experiment minus invariom' difference density revealed conformational disorder of the H atoms. Hydrogen disorder is shown to affect the EDD, the electrostatic potential and atomic properties as defined by Bader's quantum theory of atoms in molecules. A procedure to obtain the electron density distribution in the presence of disorder is proposed.

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Year:  2010        PMID: 20841923     DOI: 10.1107/S0108768110026480

Source DB:  PubMed          Journal:  Acta Crystallogr B        ISSN: 0108-7681


  5 in total

1.  ShelXle: a Qt graphical user interface for SHELXL.

Authors:  Christian B Hübschle; George M Sheldrick; Birger Dittrich
Journal:  J Appl Crystallogr       Date:  2011-11-12       Impact factor: 3.304

2.  Experimental Electron Density and Neutron Diffraction Studies on the Polymorphs of Sulfathiazole.

Authors:  Ioana Sovago; Matthias J Gutmann; J Grant Hill; Hans Martin Senn; Lynne H Thomas; Chick C Wilson; Louis J Farrugia
Journal:  Cryst Growth Des       Date:  2014-01-17       Impact factor: 4.076

3.  Hydrogen atoms can be located accurately and precisely by x-ray crystallography.

Authors:  Magdalena Woińska; Simon Grabowsky; Paulina M Dominiak; Krzysztof Woźniak; Dylan Jayatilaka
Journal:  Sci Adv       Date:  2016-05-27       Impact factor: 14.136

4.  A variable-temperature X-ray diffraction and theoretical study of conformational polymorphism in a complex organic molecule (DTC).

Authors:  Andrea Gionda; Giovanni Macetti; Laura Loconte; Silvia Rizzato; Ahmed M Orlando; Carlo Gatti; Leonardo Lo Presti
Journal:  RSC Adv       Date:  2018-11-14       Impact factor: 3.361

Review 5.  Contributions of charge-density research to medicinal chemistry.

Authors:  Birger Dittrich; Chérif F Matta
Journal:  IUCrJ       Date:  2014-09-23       Impact factor: 4.769

  5 in total

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