Literature DB >> 20835991

Computational modeling of epithelial tissues.

Rod Smallwood1.   

Abstract

There is an extensive literature on the computational modeling of epithelial tissues at all levels from subcellular to whole tissue. This review concentrates on behavior at the individual cell to whole tissue level, and particularly on organizational aspects, and provides an indication of where information from other areas, such as the modeling of angiogenesis, is relevant. The skin, and the lining of all of the body cavities (lung, gut, cervix, bladder etc) are epithelial tissues, which in a topological sense are the boundary between inside and outside the body. They are thin sheets of cells (usually of the order of 0.5 mm thick) without extracellular matrix, have a relatively simple structure, and contain few types of cells. They have important barrier, secretory and transport functions, which are essential for the maintenance of life, so homeostasis and wound healing are important aspects of the behavior of epithelial tissues. Carcinomas originate in epithelial tissues.There are essentially two approaches to modeling tissues--to start at the level of the tissue (i.e., a length scale of the order of 1 mm) and develop generalized equations for behavior (a continuum approach); or to start at the level of the cell (i.e., a length scale of the order of 10 µm) and develop tissue behavior as an emergent property of cellular behavior (an individual-based approach). As will be seen, these are not mutually exclusive approaches, and they come in a variety of flavors.

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Year:  2009        PMID: 20835991     DOI: 10.1002/wsbm.18

Source DB:  PubMed          Journal:  Wiley Interdiscip Rev Syst Biol Med        ISSN: 1939-005X


  10 in total

1.  Mechanics and remodelling of cell packings in epithelia.

Authors:  D B Staple; R Farhadifar; J-C Röper; B Aigouy; S Eaton; F Jülicher
Journal:  Eur Phys J E Soft Matter       Date:  2010-11-17       Impact factor: 1.890

Review 2.  Normal morphogenesis of epithelial tissues and progression of epithelial tumors.

Authors:  Chun-Chao Wang; Leen Jamal; Kevin A Janes
Journal:  Wiley Interdiscip Rev Syst Biol Med       Date:  2011-09-02

3.  Linking changes in epithelial morphogenesis to cancer mutations using computational modeling.

Authors:  Katarzyna A Rejniak; Shizhen E Wang; Nicole S Bryce; Hang Chang; Bahram Parvin; Jerome Jourquin; Lourdes Estrada; Joe W Gray; Carlos L Arteaga; Alissa M Weaver; Vito Quaranta; Alexander R A Anderson
Journal:  PLoS Comput Biol       Date:  2010-08-26       Impact factor: 4.475

4.  A two-dimensional model of the colonic crypt accounting for the role of the basement membrane and pericryptal fibroblast sheath.

Authors:  Sara-Jane Dunn; Paul L Appleton; Scott A Nelson; Inke S Näthke; David J Gavaghan; James M Osborne
Journal:  PLoS Comput Biol       Date:  2012-05-24       Impact factor: 4.475

Review 5.  Modeling bioavailability to organs protected by biological barriers.

Authors:  Nadia Quignot
Journal:  In Silico Pharmacol       Date:  2013-05-31

Review 6.  Agent-based modeling: a systematic assessment of use cases and requirements for enhancing pharmaceutical research and development productivity.

Authors:  C Anthony Hunt; Ryan C Kennedy; Sean H J Kim; Glen E P Ropella
Journal:  Wiley Interdiscip Rev Syst Biol Med       Date:  2013-06-04

7.  Mathematical modeling of ventilator-induced lung inflammation.

Authors:  Sarah Minucci; Rebecca L Heise; Michael S Valentine; Franck J Kamga Gninzeko; Angela M Reynolds
Journal:  J Theor Biol       Date:  2021-04-27       Impact factor: 2.405

8.  Efficacy, Safety, and Tolerance of a New Injection Technique for High- and Low-Molecular-Weight Hyaluronic Acid Hybrid Complexes.

Authors:  Carmen Laurino; Beniamino Palmieri; Alessandro Coacci
Journal:  Eplasty       Date:  2015-10-08

9.  Computational models reveal a passive mechanism for cell migration in the crypt.

Authors:  Sara-Jane Dunn; Inke S Näthke; James M Osborne
Journal:  PLoS One       Date:  2013-11-18       Impact factor: 3.240

10.  Quantification of Proteins Involved in Intestinal Epithelial Handling of Xenobiotics.

Authors:  Zubida M Al-Majdoub; Narciso Couto; Brahim Achour; Matthew D Harwood; Gordon Carlson; Geoffrey Warhurst; Jill Barber; Amin Rostami-Hodjegan
Journal:  Clin Pharmacol Ther       Date:  2020-12-05       Impact factor: 6.875

  10 in total

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