Literature DB >> 20833788

Role of plant residues in determining temporal patterns of the activity, size, and structure of nitrate reducer communities in soil.

D Chèneby1, D Bru, N Pascault, P A Maron, L Ranjard, L Philippot.   

Abstract

The incorporation of plant residues into soil not only represents an opportunity to limit soil organic matter depletion resulting from cultivation but also provides a valuable source of nutrients such as nitrogen. However, the consequences of plant residue addition on soil microbial communities involved in biochemical cycles other than the carbon cycle are poorly understood. In this study, we investigated the responses of one N-cycling microbial community, the nitrate reducers, to wheat, rape, and alfalfa residues for 11 months after incorporation into soil in a field experiment. A 20- to 27-fold increase in potential nitrate reduction activity was observed for residue-amended plots compared to the nonamended plots during the first week. This stimulating effect of residues on the activity of the nitrate-reducing community rapidly decreased but remained significant over 11 months. During this period, our results suggest that the potential nitrate reduction activity was regulated by both carbon availability and temperature. The presence of residues also had a significant effect on the abundance of nitrate reducers estimated by quantitative PCR of the narG and napA genes, encoding the membrane-bound and periplasmic nitrate reductases, respectively. In contrast, the incorporation of the plant residues into soil had little impact on the structure of the narG and napA nitrate-reducing community determined by PCR-restriction fragment length polymorphism (RFLP) fingerprinting. Overall, our results revealed that the addition of plant residues can lead to important long-term changes in the activity and size of a microbial community involved in N cycling but with limited effects of the type of plant residue itself.

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Year:  2010        PMID: 20833788      PMCID: PMC2976265          DOI: 10.1128/AEM.01497-10

Source DB:  PubMed          Journal:  Appl Environ Microbiol        ISSN: 0099-2240            Impact factor:   4.792


  19 in total

Review 1.  Dissimilatory nitrate reductases in bacteria.

Authors:  L Philippot; O Højberg
Journal:  Biochim Biophys Acta       Date:  1999-07-07

Review 2.  Prokaryotic nitrate reduction: molecular properties and functional distinction among bacterial nitrate reductases.

Authors:  C Moreno-Vivián; P Cabello; M Martínez-Luque; R Blasco; F Castillo
Journal:  J Bacteriol       Date:  1999-11       Impact factor: 3.490

Review 3.  Tracking nitrate reducers and denitrifiers in the environment.

Authors:  L Philippot
Journal:  Biochem Soc Trans       Date:  2005-02       Impact factor: 5.407

4.  Relative abundances of proteobacterial membrane-bound and periplasmic nitrate reductases in selected environments.

Authors:  D Bru; A Sarr; L Philippot
Journal:  Appl Environ Microbiol       Date:  2007-07-13       Impact factor: 4.792

5.  Do microbial numbers count? Quantifying the regulation of biogeochemical fluxes by population size and cellular activity.

Authors:  Wilfred F M Röling
Journal:  FEMS Microbiol Ecol       Date:  2007-07-05       Impact factor: 4.194

6.  Disentangling the rhizosphere effect on nitrate reducers and denitrifiers: insight into the role of root exudates.

Authors:  S Henry; S Texier; S Hallet; D Bru; C Dambreville; D Chèneby; F Bizouard; J C Germon; L Philippot
Journal:  Environ Microbiol       Date:  2008-04-03       Impact factor: 5.491

7.  In situ dynamics of microbial communities during decomposition of wheat, rape, and alfalfa residues.

Authors:  Noémie Pascault; Lauric Cécillon; Olivier Mathieu; Catherine Hénault; Amadou Sarr; Jean Lévêque; Pascal Farcy; Lionel Ranjard; Pierre-Alain Maron
Journal:  Microb Ecol       Date:  2010-07-01       Impact factor: 4.552

8.  Frequency and diversity of nitrate reductase genes among nitrate-dissimilating Pseudomonas in the rhizosphere of perennial grasses grown in field conditions.

Authors:  L Roussel-Delif; S Tarnawski; J Hamelin; L Philippot; M Aragno; N Fromin
Journal:  Microb Ecol       Date:  2005-01-11       Impact factor: 4.552

Review 9.  Cell biology and molecular basis of denitrification.

Authors:  W G Zumft
Journal:  Microbiol Mol Biol Rev       Date:  1997-12       Impact factor: 11.056

10.  Differential responses of nitrate reducer community size, structure, and activity to tillage systems.

Authors:  D Chèneby; A Brauman; B Rabary; L Philippot
Journal:  Appl Environ Microbiol       Date:  2009-03-20       Impact factor: 4.792

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  1 in total

1.  Differentiated response of denitrifying communities to fertilization regime in paddy soil.

Authors:  Zhe Chen; Jinbo Liu; Minna Wu; Xiaoli Xie; Jinshui Wu; Wenxue Wei
Journal:  Microb Ecol       Date:  2011-08-03       Impact factor: 4.552

  1 in total

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