Literature DB >> 20831870

Predicted bacteriorhodopsin from Exiguobacterium sibiricum is a functional proton pump.

L E Petrovskaya1, E P Lukashev, V V Chupin, S V Sychev, E N Lyukmanova, E A Kryukova, R H Ziganshin, E V Spirina, E M Rivkina, R A Khatypov, L G Erokhina, D A Gilichinsky, V A Shuvalov, M P Kirpichnikov.   

Abstract

The predicted Exigobacterium sibiricum bacterirhodopsin gene was amplified from an ancient Siberian permafrost sample. The protein bacteriorhodopsin from Exiguobacterium sibiricum (ESR) encoded by this gene was expressed in Escherichia coli membrane. ESR bound all-trans-retinal and displayed an absorbance maximum at 534nm without dark adaptation. The ESR photocycle is characterized by fast formation of an M intermediate and the presence of a significant amount of an O intermediate. Proteoliposomes with ESR incorporated transport protons in an outward direction leading to medium acidification. Proton uptake at the cytoplasmic surface of these organelles precedes proton release and coincides with M decay/O rise of the ESR.
Copyright © 2010 Federation of European Biochemical Societies. Published by Elsevier B.V. All rights reserved.

Entities:  

Mesh:

Substances:

Year:  2010        PMID: 20831870     DOI: 10.1016/j.febslet.2010.09.005

Source DB:  PubMed          Journal:  FEBS Lett        ISSN: 0014-5793            Impact factor:   4.124


  21 in total

1.  Aspartate-histidine interaction in the retinal schiff base counterion of the light-driven proton pump of Exiguobacterium sibiricum.

Authors:  S P Balashov; L E Petrovskaya; E P Lukashev; E S Imasheva; A K Dioumaev; J M Wang; S V Sychev; D A Dolgikh; A B Rubin; M P Kirpichnikov; J K Lanyi
Journal:  Biochemistry       Date:  2012-07-10       Impact factor: 3.162

Review 2.  Microbial and animal rhodopsins: structures, functions, and molecular mechanisms.

Authors:  Oliver P Ernst; David T Lodowski; Marcus Elstner; Peter Hegemann; Leonid S Brown; Hideki Kandori
Journal:  Chem Rev       Date:  2013-12-23       Impact factor: 60.622

3.  Thermal and spectroscopic characterization of a proton pumping rhodopsin from an extreme thermophile.

Authors:  Takashi Tsukamoto; Keiichi Inoue; Hideki Kandori; Yuki Sudo
Journal:  J Biol Chem       Date:  2013-06-05       Impact factor: 5.157

4.  Structural insights into the proton pumping by unusual proteorhodopsin from nonmarine bacteria.

Authors:  Ivan Gushchin; Pavel Chervakov; Pavel Kuzmichev; Alexander N Popov; Ekaterina Round; Valentin Borshchevskiy; Andrii Ishchenko; Lada Petrovskaya; Vladimir Chupin; Dmitry A Dolgikh; Alexander S Arseniev; Alexander A Arseniev; Mikhail Kirpichnikov; Valentin Gordeliy
Journal:  Proc Natl Acad Sci U S A       Date:  2013-07-19       Impact factor: 11.205

5.  Allosteric Effects of the Proton Donor on the Microbial Proton Pump Proteorhodopsin.

Authors:  Sadegh Faramarzi; Jun Feng; Blake Mertz
Journal:  Biophys J       Date:  2018-08-29       Impact factor: 4.033

6.  Gloeobacter rhodopsin, limitation of proton pumping at high electrochemical load.

Authors:  Arend Vogt; Jonas Wietek; Peter Hegemann
Journal:  Biophys J       Date:  2013-11-05       Impact factor: 4.033

7.  Diversity, Mechanism, and Optogenetic Application of Light-Driven Ion Pump Rhodopsins.

Authors:  Keiichi Inoue
Journal:  Adv Exp Med Biol       Date:  2021       Impact factor: 2.622

Review 8.  Marine Bacterial and Archaeal Ion-Pumping Rhodopsins: Genetic Diversity, Physiology, and Ecology.

Authors:  Jarone Pinhassi; Edward F DeLong; Oded Béjà; José M González; Carlos Pedrós-Alió
Journal:  Microbiol Mol Biol Rev       Date:  2016-09-14       Impact factor: 11.056

9.  Photocycle of Exiguobacterium sibiricum rhodopsin characterized by low-temperature trapping in the IR and time-resolved studies in the visible.

Authors:  Andrei K Dioumaev; Lada E Petrovskaya; Jennifer M Wang; Sergei P Balashov; Dmitriy A Dolgikh; Mikhail P Kirpichnikov; Janos K Lanyi
Journal:  J Phys Chem B       Date:  2013-06-10       Impact factor: 2.991

10.  Breaking the carboxyl rule: lysine 96 facilitates reprotonation of the Schiff base in the photocycle of a retinal protein from Exiguobacterium sibiricum.

Authors:  Sergei P Balashov; Lada E Petrovskaya; Eleonora S Imasheva; Evgeniy P Lukashev; Andrei K Dioumaev; Jennifer M Wang; Sergey V Sychev; Dmitriy A Dolgikh; Andrei B Rubin; Mikhail P Kirpichnikov; Janos K Lanyi
Journal:  J Biol Chem       Date:  2013-05-21       Impact factor: 5.157

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.