Literature DB >> 20827566

Associating clinical archetypes through UMLS Metathesaurus term clusters.

Leonardo Lezcano1, Salvador Sánchez-Alonso, Miguel-Angel Sicilia.   

Abstract

Clinical archetypes are modular definitions of clinical data, expressed using standard or open constraint-based data models as the CEN EN13606 and openEHR. There is an increasing archetype specification activity that raises the need for techniques to associate archetypes to support better management and user navigation in archetype repositories. This paper reports on a computational technique to generate tentative archetype associations by mapping them through term clusters obtained from the UMLS Metathesaurus. The terms are used to build a bipartite graph model and graph connectivity measures can be used for deriving associations.

Mesh:

Year:  2010        PMID: 20827566     DOI: 10.1007/s10916-010-9586-9

Source DB:  PubMed          Journal:  J Med Syst        ISSN: 0148-5598            Impact factor:   4.460


  10 in total

1.  The Unified Medical Language System (UMLS): integrating biomedical terminology.

Authors:  Olivier Bodenreider
Journal:  Nucleic Acids Res       Date:  2004-01-01       Impact factor: 16.971

2.  The UMLS knowledge source server: an object model for delivering UMLS data.

Authors:  Anantha Bangalore; Karen E Thorn; Carolyn Tilley; Lee Peters
Journal:  AMIA Annu Symp Proc       Date:  2003

3.  Comparing different approaches to two-level modelling of electronic health records.

Authors:  Line Michelsen; Signe S Pedersen; Helene B Tilma; Stig K Andersen
Journal:  Stud Health Technol Inform       Date:  2005

4.  Using UMLS metathesaurus concepts to describe medical images: dermatology vocabulary.

Authors:  James W Woods; Charles A Sneiderman; Kamran Hameed; Michael J Ackerman; Charlie Hatton
Journal:  Comput Biol Med       Date:  2006-01       Impact factor: 4.589

5.  The openEHR Java reference implementation project.

Authors:  Rong Chen; Gunnar Klein
Journal:  Stud Health Technol Inform       Date:  2007

6.  A unified representation of findings in clinical radiology using the UMLS and DICOM.

Authors:  Valérie Bertaud; Jérémy Lasbleiz; Fleur Mougin; Anita Burgun; Régis Duvauferrier
Journal:  Int J Med Inform       Date:  2008-02-21       Impact factor: 4.046

7.  A collaborative medical case authoring environment based on the UMLS.

Authors:  Siriwan Suebnukarn; Peter Haddawy; Phattanapon Rhienmora
Journal:  J Biomed Inform       Date:  2007-09-02       Impact factor: 6.317

8.  The Unified Medical Language System.

Authors:  D A Lindberg; B L Humphreys; A T McCray
Journal:  Methods Inf Med       Date:  1993-08       Impact factor: 2.176

9.  A method exploiting syntactic patterns and the UMLS semantics for aligning biomedical ontologies: the case of OBO disease ontologies.

Authors:  Gwenaëlle Marquet; Jean Mosser; Anita Burgun
Journal:  Int J Med Inform       Date:  2007-05-22       Impact factor: 4.046

10.  Towards linking patients and clinical information: detecting UMLS concepts in e-mail.

Authors:  Patricia Flatley Brennan; Alan R Aronson
Journal:  J Biomed Inform       Date:  2003 Aug-Oct       Impact factor: 6.317

  10 in total
  1 in total

1.  Automated mapping of clinical terms into SNOMED-CT. An application to codify procedures in pathology.

Authors:  J L Allones; D Martinez; M Taboada
Journal:  J Med Syst       Date:  2014-09-02       Impact factor: 4.460

  1 in total

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