Literature DB >> 20824304

A fast and fully automatic method for cerebrovascular segmentation on time-of-flight (TOF) MRA image.

Xin Gao1, Yoshikazu Uchiyama, Xiangrong Zhou, Takeshi Hara, Takahiko Asano, Hiroshi Fujita.   

Abstract

The precise three-dimensional (3-D) segmentation of cerebral vessels from magnetic resonance angiography (MRA) images is essential for the detection of cerebrovascular diseases (e.g., occlusion, aneurysm). The complex 3-D structure of cerebral vessels and the low contrast of thin vessels in MRA images make precise segmentation difficult. We present a fast, fully automatic segmentation algorithm based on statistical model analysis and improved curve evolution for extracting the 3-D cerebral vessels from a time-of-flight (TOF) MRA dataset. Cerebral vessels and other tissue (brain tissue, CSF, and bone) in TOF MRA dataset are modeled by Gaussian distribution and combination of Rayleigh with several Gaussian distributions separately. The region distribution combined with gradient information is used in edge-strength of curve evolution as one novel mode. This edge-strength function is able to determine the boundary of thin vessels with low contrast around brain tissue accurately and robustly. Moreover, a fast level set method is developed to implement the curve evolution to assure high efficiency of the cerebrovascular segmentation. Quantitative comparisons with 10 sets of manual segmentation results showed that the average volume sensitivity, the average branch sensitivity, and average mean absolute distance error are 93.6%, 95.98%, and 0.333 mm, respectively. By applying the algorithm to 200 clinical datasets from three hospitals, it is demonstrated that the proposed algorithm can provide good quality segmentation capable of extracting a vessel with a one-voxel diameter in less than 2 min. Its accuracy and speed make this novel algorithm more suitable for a clinical computer-aided diagnosis system.

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Year:  2011        PMID: 20824304      PMCID: PMC3138936          DOI: 10.1007/s10278-010-9326-1

Source DB:  PubMed          Journal:  J Digit Imaging        ISSN: 0897-1889            Impact factor:   4.056


  24 in total

1.  Acquisition, segmentation and tracking of the cerebral vascular tree on 3D magnetic resonance angiography images.

Authors:  N Flasque; M Desvignes; J M Constans; M Revenu
Journal:  Med Image Anal       Date:  2001-09       Impact factor: 8.545

2.  Initialization, noise, singularities, and scale in height ridge traversal for tubular object centerline extraction.

Authors:  Stephen R Aylward; Elizabeth Bullitt
Journal:  IEEE Trans Med Imaging       Date:  2002-02       Impact factor: 10.048

3.  Fusing speed and phase information for vascular segmentation of phase contrast MR angiograms.

Authors:  Albert C S Chung; J Alison Noble; Paul Summers
Journal:  Med Image Anal       Date:  2002-06       Impact factor: 8.545

Review 4.  A review on MR vascular image processing: skeleton versus nonskeleton approaches: part II.

Authors:  Jasjit S Suri; Kecheng Liu; Laura Reden; Swamy Laxminarayan
Journal:  IEEE Trans Inf Technol Biomed       Date:  2002-12

5.  3D volume segmentation of MRA data sets using level sets: image processing and display.

Authors:  Aly A Farag; Hossam Hassan; Robert Falk; Stephen G Hushek
Journal:  Acad Radiol       Date:  2004-04       Impact factor: 3.173

6.  Region-growing segmentation of brain vessels: an atlas-based automatic approach.

Authors:  Nicolas Passat; Christian Ronse; Joseph Baruthio; Jean-Paul Armspach; Claude Maillot; Christine Jahn
Journal:  J Magn Reson Imaging       Date:  2005-06       Impact factor: 4.813

7.  Automatic cerebrovascular segmentation by accurate probabilistic modeling of TOF-MRA images.

Authors:  Ayman El-Baz; Aly A Farag; Georgy Gimel'farb; Stephen G Hushek
Journal:  Med Image Comput Comput Assist Interv       Date:  2005

8.  Adaptive segmentation of MRI data.

Authors:  W M Wells; W L Grimson; R Kikinis; F A Jolesz
Journal:  IEEE Trans Med Imaging       Date:  1996       Impact factor: 10.048

9.  Multiscale active contour model for vessel segmentation.

Authors:  G Yu; P Li; Y L Miao; Z Z Bian
Journal:  J Med Eng Technol       Date:  2008 Jan-Feb

10.  An adaptive segmentation algorithm for time-of-flight MRA data.

Authors:  D L Wilson; J A Noble
Journal:  IEEE Trans Med Imaging       Date:  1999-10       Impact factor: 10.048

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  10 in total

1.  BV-GAN: 3D time-of-flight magnetic resonance angiography cerebrovascular vessel segmentation using adversarial CNNs.

Authors:  Dor Amran; Moran Artzi; Orna Aizenstein; Dafna Ben Bashat; Amit H Bermano
Journal:  J Med Imaging (Bellingham)       Date:  2022-08-31

2.  Algorithms for segmenting cerebral time-of-flight magnetic resonance angiograms from volunteers and anemic patients.

Authors:  Alexander Saunders; Kevin S King; Stefan Blüml; John C Wood; Matthew Borzage
Journal:  J Med Imaging (Bellingham)       Date:  2021-04-28

3.  Fractal dimension and vessel complexity in patients with cerebral arteriovenous malformations.

Authors:  Gernot Reishofer; Karl Koschutnig; Christian Enzinger; Franz Ebner; Helmut Ahammer
Journal:  PLoS One       Date:  2012-07-18       Impact factor: 3.240

4.  Interactive 3D Analysis of Blood Vessel Trees and Collateral Vessel Volumes in Magnetic Resonance Angiograms in the Mouse Ischemic Hindlimb Model.

Authors:  Peter C Marks; Marilena Preda; Terry Henderson; Lucy Liaw; Volkhard Lindner; Robert E Friesel; Ilka M Pinz
Journal:  Open Med Imaging J       Date:  2013-10-31

5.  Robust Segmentation of the Full Cerebral Vasculature in 4D CT of Suspected Stroke Patients.

Authors:  Midas Meijs; Ajay Patel; Sil C van de Leemput; Mathias Prokop; Ewoud J van Dijk; Frank-Erik de Leeuw; Frederick J A Meijer; Bram van Ginneken; Rashindra Manniesing
Journal:  Sci Rep       Date:  2017-11-15       Impact factor: 4.379

6.  A Fully Automated Method for Segmenting Arteries and Quantifying Vessel Radii on Magnetic Resonance Angiography Images of Varying Projection Thickness.

Authors:  Sivakami Avadiappan; Seyedmehdi Payabvash; Melanie A Morrison; Angela Jakary; Christopher P Hess; Janine M Lupo
Journal:  Front Neurosci       Date:  2020-06-16       Impact factor: 4.677

Review 7.  Medical Engineering and Microneurosurgery: Application and Future.

Authors:  Akio Morita; Shigeo Sora; Hirofumi Nakatomi; Kanako Harada; Naohiko Sugita; Nobuhito Saito; Mamoru Mitsuishi
Journal:  Neurol Med Chir (Tokyo)       Date:  2016-07-26       Impact factor: 1.742

8.  A vessel segmentation method for multi-modality angiographic images based on multi-scale filtering and statistical models.

Authors:  Pei Lu; Jun Xia; Zhicheng Li; Jing Xiong; Jian Yang; Shoujun Zhou; Lei Wang; Mingyang Chen; Cheng Wang
Journal:  Biomed Eng Online       Date:  2016-11-08       Impact factor: 2.819

9.  Automated Segmentation of Trigeminal Nerve and Cerebrovasculature in MR-Angiography Images by Deep Learning.

Authors:  Jinghui Lin; Lei Mou; Qifeng Yan; Shaodong Ma; Xingyu Yue; Shengjun Zhou; Zhiqing Lin; Jiong Zhang; Jiang Liu; Yitian Zhao
Journal:  Front Neurosci       Date:  2021-12-10       Impact factor: 4.677

10.  An evaluation of performance measures for arterial brain vessel segmentation.

Authors:  Orhun Utku Aydin; Abdel Aziz Taha; Adam Hilbert; Ahmed A Khalil; Ivana Galinovic; Jochen B Fiebach; Dietmar Frey; Vince Istvan Madai
Journal:  BMC Med Imaging       Date:  2021-07-16       Impact factor: 1.930

  10 in total

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