Literature DB >> 20823528

Cloning, expression, crystallization and preliminary X-ray crystallographic analysis of a human condensin SMC2 hinge domain with short coiled coils.

Kazuki Kawahara1, Shota Nakamura, Yasuhiro Katsu, Daisuke Motooka, Yuki Hosokawa, Yukiko Kojima, Keiko Matsukawa, Hiroto Takinowaki, Susumu Uchiyama, Yuji Kobayashi, Kiichi Fukui, Tadayasu Ohkubo.   

Abstract

In higher eukaryotes, the condensin complex, which mainly consists of two structural maintenance of chromosomes (SMC) subunits, SMC2 (CAP-E) and SMC4 (CAP-C), plays a critical role in the formation of higher order chromosome structures during mitosis. Biochemical and electron-microscopic studies have revealed that the SMC2 and SMC4 subunits dimerize through the interaction of their hinge domains, forming a characteristic V-shaped heterodimer. However, the details of their function are still not fully understood owing to a lack of structural information at the atomic level. In this study, the human SMC2 hinge domain with short coiled coils was cloned, expressed, purified and crystallized in the orthorhombic space group C222 in native and SeMet-derivatized forms. Because of the poor diffraction properties of these crystals, the mutant Leu68-->SeMet was designed and crystallized in order to obtain the experimental phases. The SeMet-derivatized crystals of the mutant belonged to space group P3(2)12, with unit-cell parameters a=b=128.8, c=91.4 A. The diffraction data obtained from a crystal that diffracted to 2.4 A resolution were suitable for SAD phasing.

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Year:  2010        PMID: 20823528      PMCID: PMC2935229          DOI: 10.1107/S1744309110028721

Source DB:  PubMed          Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun        ISSN: 1744-3091


  12 in total

1.  Molecular architecture of SMC proteins and the yeast cohesin complex.

Authors:  Christian H Haering; Jan Löwe; Andreas Hochwagen; Kim Nasmyth
Journal:  Mol Cell       Date:  2002-04       Impact factor: 17.970

2.  Condensin architecture and interaction with DNA: regulatory non-SMC subunits bind to the head of SMC heterodimer.

Authors:  Shige H Yoshimura; Kohji Hizume; Akiko Murakami; Takashi Sutani; Kunio Takeyasu; Mitsuhiro Yanagida
Journal:  Curr Biol       Date:  2002-03-19       Impact factor: 10.834

3.  Differential contributions of condensin I and condensin II to mitotic chromosome architecture in vertebrate cells.

Authors:  Takao Ono; Ana Losada; Michiko Hirano; Michael P Myers; Andrew F Neuwald; Tatsuya Hirano
Journal:  Cell       Date:  2003-10-03       Impact factor: 41.582

4.  Crystallization and preliminary X-ray analysis of a conserved hypothetical protein PAE2754 from Pyrobaculum aerophilum and of a double Leu-->Met mutant engineered for MAD phasing.

Authors:  Kristina Bäckbro; Annette Roos; Edward N Baker; Vickery L Arcus
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2004-03-23

Review 5.  Condensins: organizing and segregating the genome.

Authors:  Tatsuya Hirano
Journal:  Curr Biol       Date:  2005-04-12       Impact factor: 10.834

6.  Chromosome protein framework from proteome analysis of isolated human metaphase chromosomes.

Authors:  Kiichi Fukui; Susumu Uchiyama
Journal:  Chem Rec       Date:  2007       Impact factor: 6.771

7.  Molecular and genetic analysis of condensin function in vertebrate cells.

Authors:  Damien F Hudson; Shinya Ohta; Tina Freisinger; Fiona Macisaac; Lau Sennels; Flavia Alves; Fan Lai; Alastair Kerr; Juri Rappsilber; William C Earnshaw
Journal:  Mol Biol Cell       Date:  2008-05-14       Impact factor: 4.138

8.  Solvent content of protein crystals.

Authors:  B W Matthews
Journal:  J Mol Biol       Date:  1968-04-28       Impact factor: 5.469

9.  Structure and DNA binding activity of the mouse condensin hinge domain highlight common and diverse features of SMC proteins.

Authors:  Julia J Griese; Gregor Witte; Karl-Peter Hopfner
Journal:  Nucleic Acids Res       Date:  2010-02-05       Impact factor: 16.971

10.  Condensin and cohesin display different arm conformations with characteristic hinge angles.

Authors:  David E Anderson; Ana Losada; Harold P Erickson; Tatsuya Hirano
Journal:  J Cell Biol       Date:  2002-01-28       Impact factor: 10.539

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  2 in total

1.  Structural Basis for Dimer Formation of Human Condensin Structural Maintenance of Chromosome Proteins and Its Implications for Single-stranded DNA Recognition.

Authors:  Susumu Uchiyama; Kazuki Kawahara; Yuki Hosokawa; Shunsuke Fukakusa; Hiroya Oki; Shota Nakamura; Yukiko Kojima; Masanori Noda; Rie Takino; Yuya Miyahara; Takahiro Maruno; Yuji Kobayashi; Tadayasu Ohkubo; Kiichi Fukui
Journal:  J Biol Chem       Date:  2015-10-20       Impact factor: 5.157

2.  Subunits of human condensins are potential therapeutic targets for cancers.

Authors:  Hong-Zhen Wang; Si-Han Yang; Gui-Ying Li; Xudong Cao
Journal:  Cell Div       Date:  2018-02-20       Impact factor: 5.130

  2 in total

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