Literature DB >> 20823517

High-resolution structure of an alpha-spectrin SH3-domain mutant with a redesigned hydrophobic core.

Ana Cámara-Artigas1, Monserrat Andújar-Sánchez, Emilia Ortiz-Salmerón, Celia Cuadri, Eva S Cobos, Jose Manuel Martin-Garcia.   

Abstract

The alpha-spectrin SH3 domain (Spc-SH3) is a small modular domain which has been broadly used as a model protein in folding studies and these studies have sometimes been supported by structural information obtained from the coordinates of Spc-SH3 mutants. The structure of B5/D48G, a multiple mutant designed to improve the hydrophobic core and as a consequence the protein stability, has been solved at 1 A resolution. The crystals belonged to the orthorhombic space group P2(1)2(1)2(1), with unit-cell parameters a=24.79, b=37.23, c=62.95 A. This mutant also bears a D48G substitution in the distal loop and this mutation has also been reported to increase the stability of the protein by itself. The structure of the B5/D48G mutant shows a highly packed hydrophobic core and a more ordered distal loop compared with previous Spc-SH3 structures.

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Year:  2010        PMID: 20823517      PMCID: PMC2935218          DOI: 10.1107/S1744309110030095

Source DB:  PubMed          Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun        ISSN: 1744-3091


  21 in total

1.  Cooperative propagation of local stability changes from low-stability and high-stability regions in a SH3 domain.

Authors:  Salvador Casares; Obdulio López-Mayorga; M Cristina Vega; Ana Cámara-Artigas; Francisco Conejero-Lara
Journal:  Proteins       Date:  2007-05-15

2.  Crystal structure of a Src-homology 3 (SH3) domain.

Authors:  A Musacchio; M Noble; R Pauptit; R Wierenga; M Saraste
Journal:  Nature       Date:  1992-10-29       Impact factor: 49.962

3.  Obligatory steps in protein folding and the conformational diversity of the transition state.

Authors:  J C Martinez; M T Pisabarro; L Serrano
Journal:  Nat Struct Biol       Date:  1998-08

4.  Thermodynamic and structural characterization of Asn and Ala residues in the disallowed II' region of the Ramachandran plot.

Authors:  M C Vega; J C Martínez; L Serrano
Journal:  Protein Sci       Date:  2000-12       Impact factor: 6.725

5.  The effect of a proline residue on the rate of growth and the space group of alpha-spectrin SH3-domain crystals.

Authors:  Ana Cámara-Artigas; Monserrat Andújar-Sánchez; Emilia Ortiz-Salmerón; Celia Cuadri; Salvador Casares
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-11-17

6.  Solvation in protein folding analysis: combination of theoretical and experimental approaches.

Authors:  A M Fernández-Escamilla; M S Cheung; M C Vega; M Wilmanns; J N Onuchic; L Serrano
Journal:  Proc Natl Acad Sci U S A       Date:  2004-02-20       Impact factor: 11.205

Review 7.  The integration of macromolecular diffraction data.

Authors:  Andrew G W Leslie
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2005-12-14

Review 8.  Scaling and assessment of data quality.

Authors:  Philip Evans
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2005-12-14

9.  The high-resolution NMR structure of the R21A Spc-SH3:P41 complex: understanding the determinants of binding affinity by comparison with Abl-SH3.

Authors:  Salvador Casares; Eiso Ab; Henk Eshuis; Obdulio Lopez-Mayorga; Nico A J van Nuland; Francisco Conejero-Lara
Journal:  BMC Struct Biol       Date:  2007-04-02

10.  MolProbity: all-atom structure validation for macromolecular crystallography.

Authors:  Vincent B Chen; W Bryan Arendall; Jeffrey J Headd; Daniel A Keedy; Robert M Immormino; Gary J Kapral; Laura W Murray; Jane S Richardson; David C Richardson
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-12-21
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