Literature DB >> 20822901

Structural basis for binding of cyclic 2-oxoglutarate analogues to factor-inhibiting hypoxia-inducible factor.

Ana Conejo-Garcia1, Michael A McDonough, Christoph Loenarz, Luke A McNeill, Kirsty S Hewitson, Wei Ge, Benoît M Liénard, Christopher J Schofield, Ian J Clifton.   

Abstract

Aromatic analogues of the 2-oxoglutarate co-substrate of the hypoxia-inducible factor hydroxylases are shown to bind at the active site iron: Pyridine-2,4-dicarboxylate binds as anticipated with a single molecule chelating the iron in a bidentate manner. The binding mode of a hydroxamic acid analogue, at least in the crystalline state, is unusual because two molecules of the inhibitor are observed at the active site and partial displacement of the iron binding aspartyl residue was observed.
Copyright © 2010 Elsevier Ltd. All rights reserved.

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Year:  2010        PMID: 20822901     DOI: 10.1016/j.bmcl.2010.08.032

Source DB:  PubMed          Journal:  Bioorg Med Chem Lett        ISSN: 0960-894X            Impact factor:   2.823


  9 in total

1.  The oncometabolite 2-hydroxyglutarate inhibits histone lysine demethylases.

Authors:  Rasheduzzaman Chowdhury; Kar Kheng Yeoh; Ya-Min Tian; Lars Hillringhaus; Eleanor A Bagg; Nathan R Rose; Ivanhoe K H Leung; Xuan S Li; Esther C Y Woon; Ming Yang; Michael A McDonough; Oliver N King; Ian J Clifton; Robert J Klose; Timothy D W Claridge; Peter J Ratcliffe; Christopher J Schofield; Akane Kawamura
Journal:  EMBO Rep       Date:  2011-04-01       Impact factor: 8.807

2.  Screening chelating inhibitors of HIF-prolyl hydroxylase domain 2 (PHD2) and factor inhibiting HIF (FIH).

Authors:  Shannon C Flagg; Cristina B Martin; Cornelius Y Taabazuing; Breanne E Holmes; Michael J Knapp
Journal:  J Inorg Biochem       Date:  2012-03-17       Impact factor: 4.155

3.  Spectroscopic studies of the mononuclear non-heme Fe(II) enzyme FIH: second-sphere contributions to reactivity.

Authors:  Kenneth M Light; John A Hangasky; Michael J Knapp; Edward I Solomon
Journal:  J Am Chem Soc       Date:  2013-06-20       Impact factor: 15.419

4.  Prolyl Hydroxylase Domain Protein Inhibitor Not Harboring a 2-Oxoglutarate Scaffold Protects against Hypoxic Stress.

Authors:  Kento Sonoda; Sudarma Bogahawatta; Akito Katayama; Saki Ujike; Sae Kuroki; Naho Kitagawa; Kohichi Hirotsuru; Norio Suzuki; Toshio Miyata; Shin-Ichi Kawaguchi; Tadayuki Tsujita
Journal:  ACS Pharmacol Transl Sci       Date:  2022-04-13

5.  Investigations on the role of a solvent tunnel in the α-ketoglutarate dependent oxygenase factor inhibiting HIF (FIH).

Authors:  Vanessa D Chaplin; Meaghan A Valliere; John A Hangasky; Michael J Knapp
Journal:  J Inorg Biochem       Date:  2017-10-07       Impact factor: 4.155

6.  5-Carboxy-8-hydroxyquinoline is a Broad Spectrum 2-Oxoglutarate Oxygenase Inhibitor which Causes Iron Translocation.

Authors:  Richard J Hopkinson; Anthony Tumber; Clarence Yapp; Rasheduzzaman Chowdhury; WeiShen Aik; Ka Hing Che; Xuan Shirley Li; Jan B L Kristensen; Oliver N F King; Mun Chiang Chan; Kar Kheng Yeoh; Hwanho Choi; Louise J Walport; Cyrille C Thinnes; Jacob T Bush; Clarisse Lejeune; Anna M Rydzik; Nathan R Rose; Eleanor A Bagg; Michael A McDonough; Tobias Krojer; Wyatt W Yue; Stanley S Ng; Lars Olsen; Paul E Brennan; Udo Oppermann; Susanne Muller-Knapp; Robert J Klose; Peter J Ratcliffe; Christopher J Schofield; Akane Kawamura
Journal:  Chem Sci       Date:  2013-08-01       Impact factor: 9.825

7.  Fluorinated derivatives of pyridine-2,4-dicarboxylate are potent inhibitors of human 2-oxoglutarate dependent oxygenases.

Authors:  Lennart Brewitz; Yu Nakashima; Anthony Tumber; Eidarus Salah; Christopher J Schofield
Journal:  J Fluor Chem       Date:  2021-07       Impact factor: 2.050

8.  Furan- and Thiophene-2-Carbonyl Amino Acid Derivatives Activate Hypoxia-Inducible Factor via Inhibition of Factor Inhibiting Hypoxia-Inducible Factor-1.

Authors:  Shin-Ichi Kawaguchi; Yuhei Gonda; Takuya Yamamoto; Yuki Sato; Hiroyuki Shinohara; Yohsuke Kobiki; Atsuhiko Ichimura; Takashi Dan; Motohiro Sonoda; Toshio Miyata; Akiya Ogawa; Tadayuki Tsujita
Journal:  Molecules       Date:  2018-04-11       Impact factor: 4.411

9.  Synthesis of Novel Pyridine-Carboxylates as Small-Molecule Inhibitors of Human Aspartate/Asparagine-β-Hydroxylase.

Authors:  Lennart Brewitz; Anthony Tumber; Armin Thalhammer; Eidarus Salah; Kirsten E Christensen; Christopher J Schofield
Journal:  ChemMedChem       Date:  2020-05-26       Impact factor: 3.540

  9 in total

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