Literature DB >> 20822487

Nucleosome dynamics and histone variants.

Dominique Ray-Gallet1, Geneviève Almouzni.   

Abstract

In eukaryotes, DNA is organized into chromatin, a dynamic structure that enables DNA to be accessed for processes such as transcription, replication and repair. To form, maintain or alter this organization according to cellular needs, histones, the main protein component of chromatin, are deposited, replaced, exchanged and post-translationally modified. Histone variants, which exhibit specialized deposition modes in relation to the cell cycle and possibly particular chromatin regions, add an additional level of complexity in the regulation of histone flow. During their metabolism, from their synthesis to their delivery for nucleosome formation, the histones are escorted by proteins called histone chaperones. In the present chapter we summarize our current knowledge concerning histone chaperones and their interaction with particular histones based on key structural properties. From a compilation of selected histone chaperones identified to date, we discuss how they may be placed in a network to regulate histone dynamics. Finally, we provide working models to explain how H3 variants, deposited on to DNA using different histone chaperone machineries, can be transmitted or lost through cell divisions.

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Year:  2010        PMID: 20822487     DOI: 10.1042/bse0480075

Source DB:  PubMed          Journal:  Essays Biochem        ISSN: 0071-1365            Impact factor:   8.000


  17 in total

1.  Identification of an ubinuclein 1 region required for stability and function of the human HIRA/UBN1/CABIN1/ASF1a histone H3.3 chaperone complex.

Authors:  Yong Tang; Aastha Puri; M Daniel Ricketts; Taranjit Singh Rai; Jason Hoffmann; Elise Hoi; Peter D Adams; David C Schultz; Ronen Marmorstein
Journal:  Biochemistry       Date:  2012-03-16       Impact factor: 3.162

2.  The ATP-dependent chromatin remodeling enzyme Fun30 represses transcription by sliding promoter-proximal nucleosomes.

Authors:  Boseon Byeon; Wei Wang; Artem Barski; Ryan T Ranallo; Kan Bao; Dustin E Schones; Keji Zhao; Carl Wu; Wei-Hua Wu
Journal:  J Biol Chem       Date:  2013-06-18       Impact factor: 5.157

Review 3.  Overcoming the nucleosome barrier during transcript elongation.

Authors:  Steven J Petesch; John T Lis
Journal:  Trends Genet       Date:  2012-03-31       Impact factor: 11.639

4.  Histone 3.3 participates in a self-sustaining cascade of apoptosis that contributes to the progression of chronic obstructive pulmonary disease.

Authors:  Carlos A Barrero; Oscar Perez-Leal; Mark Aksoy; Camilo Moncada; Rong Ji; Yolanda Lopez; Karthik Mallilankaraman; Muniswamy Madesh; Gerard J Criner; Steven G Kelsen; Salim Merali
Journal:  Am J Respir Crit Care Med       Date:  2013-09-15       Impact factor: 21.405

Review 5.  Recent advances in single molecule studies of nucleosomes.

Authors:  Jessica L Killian; Ming Li; Maxim Y Sheinin; Michelle D Wang
Journal:  Curr Opin Struct Biol       Date:  2011-12-13       Impact factor: 6.809

6.  Sequence features and transcriptional stalling within centromere DNA promote establishment of CENP-A chromatin.

Authors:  Sandra Catania; Alison L Pidoux; Robin C Allshire
Journal:  PLoS Genet       Date:  2015-03-04       Impact factor: 5.917

7.  Differential expression of histone H3 genes and selective association of the variant H3.7 with a specific sequence class in Stylonychia macronuclear development.

Authors:  Sakeh Forcob; Aneta Bulic; Franziska Jönsson; Hans J Lipps; Jan Postberg
Journal:  Epigenetics Chromatin       Date:  2014-02-07       Impact factor: 4.954

8.  Anp32e, a higher eukaryotic histone chaperone directs preferential recognition for H2A.Z.

Authors:  Zhuo Mao; Lu Pan; Weixiang Wang; Jian Sun; Shan Shan; Qiang Dong; Xiaoping Liang; Linchang Dai; Xiaojun Ding; She Chen; Zhuqiang Zhang; Bing Zhu; Zheng Zhou
Journal:  Cell Res       Date:  2014-03-11       Impact factor: 25.617

9.  Unzipping single DNA molecules to study nucleosome structure and dynamics.

Authors:  Ming Li; Michelle D Wang
Journal:  Methods Enzymol       Date:  2012       Impact factor: 1.600

10.  A permissive chromatin structure is adopted prior to site-specific DNA demethylation of developmentally expressed genes involved in macronuclear differentiation.

Authors:  Aneta Bulic; Jan Postberg; Andreas Fischer; Franziska Jönsson; Günter Reuter; Hans J Lipps
Journal:  Epigenetics Chromatin       Date:  2013-03-05       Impact factor: 4.954

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