Literature DB >> 20820870

Genomic aberrations associated with outcome in anaplastic oligodendroglial tumors treated within the EORTC phase III trial 26951.

Ahmed Idbaih1, Cyril Dalmasso, Mathilde Kouwenhoven, Judith Jeuken, Catherine Carpentier, Thierry Gorlia, Johan M Kros, Pim French, Johannes Teepen, Philippe Broët, Olivier Delattre, Karima Mokhtari, Marc Sanson, Jean-Yves Delattre, Martin van den Bent, Khê Hoang-Xuan.   

Abstract

Despite similar morphological aspects, anaplastic oligodendroglial tumors (AOTs) form a heterogeneous clinical subgroup of gliomas. The chromosome arms 1p/19q codeletion has been shown to be a relevant biomarker in AOTs and to be perfectly exclusive from EGFR amplification in gliomas. To identify new genomic regions associated with prognosis, 60 AOTs from the EORTC trial 26951 were analyzed retrospectively using BAC-array-based comparative genomic hybridization. The data were processed using a binary tree method. Thirty-three BACs with prognostic value were identified distinguishing four genomic subgroups of AOTs with different prognosis (p < 0.0001). Type I tumors (25%) were characterized by: (1) an EGFR amplification, (2) a poor prognosis, (3) a higher rate of necrosis, and (4) an older age of patients. Type II tumors (21.7%) had: (1) loss of prognostic BACs located on 1p tightly associated with 19q deletion, (2) a longer survival, (3) an oligodendroglioma phenotype, and (4) a frontal location in brain. Type III AOTs (11.7%) exhibited: (1) a deletion of prognostic BACs located on 21q, and (2) a short survival. Finally, type IV tumors (41.7%) had different genomic patterns and prognosis than type I, II and III AOTs. Multivariate analysis showed that genomic type provides additional prognostic data to clinical, imaging and pathological features. Similar results were obtained in the cohort of 45 centrally reviewed-validated cases of AOTs. Whole genome analysis appears useful to screen the numerous genomic abnormalities observed in AOTs and to propose new biomarkers particularly in the non-1p/19q codeleted AOTs.

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Year:  2010        PMID: 20820870      PMCID: PMC3097344          DOI: 10.1007/s11060-010-0380-9

Source DB:  PubMed          Journal:  J Neurooncol        ISSN: 0167-594X            Impact factor:   4.130


  50 in total

1.  Alterations of chromosome arms 1p and 19q as predictors of survival in oligodendrogliomas, astrocytomas, and mixed oligoastrocytomas.

Authors:  J S Smith; A Perry; T J Borell; H K Lee; J O'Fallon; S M Hosek; D Kimmel; A Yates; P C Burger; B W Scheithauer; R B Jenkins
Journal:  J Clin Oncol       Date:  2000-02       Impact factor: 44.544

2.  Identification of consistent novel submegabase deletions in low-grade oligodendrogliomas using array-based comparative genomic hybridization.

Authors:  Michael R Rossi; Daniel Gaile; Jeffrey Laduca; Sei-Ichi Matsui; Jeffrey Conroy; Devin McQuaid; David Chervinsky; Roger Eddy; Hai-Shen Chen; Gene H Barnett; Norma J Nowak; John K Cowell
Journal:  Genes Chromosomes Cancer       Date:  2005-09       Impact factor: 5.006

3.  Oligodendrogliomas: reproducibility and prognostic value of histologic diagnosis and grading.

Authors:  C Giannini; B W Scheithauer; A L Weaver; P C Burger; J M Kros; S Mork; M B Graeber; S Bauserman; J C Buckner; J Burton; R Riepe; H D Tazelaar; A G Nascimento; T Crotty; G L Keeney; P Pernicone; H Altermatt
Journal:  J Neuropathol Exp Neurol       Date:  2001-03       Impact factor: 3.685

4.  Tumor location and growth pattern correlate with genetic signature in oligodendroglial neoplasms.

Authors:  M C Zlatescu; A TehraniYazdi; H Sasaki; J F Megyesi; R A Betensky; D N Louis; J G Cairncross
Journal:  Cancer Res       Date:  2001-09-15       Impact factor: 12.701

5.  High-resolution genome-wide mapping of genetic alterations in human glial brain tumors.

Authors:  Markus Bredel; Claudia Bredel; Dejan Juric; Griffith R Harsh; Hannes Vogel; Lawrence D Recht; Branimir I Sikic
Journal:  Cancer Res       Date:  2005-05-15       Impact factor: 12.701

Review 6.  The WHO classification of tumors of the nervous system.

Authors:  Paul Kleihues; David N Louis; Bernd W Scheithauer; Lucy B Rorke; Guido Reifenberger; Peter C Burger; Webster K Cavenee
Journal:  J Neuropathol Exp Neurol       Date:  2002-03       Impact factor: 3.685

7.  The oligodendroglial lineage marker OLIG2 is universally expressed in diffuse gliomas.

Authors:  Keith L Ligon; John A Alberta; Alvin T Kho; Jennifer Weiss; Mary R Kwaan; Catherine L Nutt; David N Louis; Charles D Stiles; David H Rowitch
Journal:  J Neuropathol Exp Neurol       Date:  2004-05       Impact factor: 3.685

8.  Molecular genetic analysis of oligodendroglial tumors shows preferential allelic deletions on 19q and 1p.

Authors:  J Reifenberger; G Reifenberger; L Liu; C D James; W Wechsler; V P Collins
Journal:  Am J Pathol       Date:  1994-11       Impact factor: 4.307

9.  Characterization of the 1p/19q chromosomal loss in oligodendrogliomas using comparative genomic hybridization arrays (CGHa).

Authors:  John K Cowell; Gene H Barnett; Norma J Nowak
Journal:  J Neuropathol Exp Neurol       Date:  2004-02       Impact factor: 3.685

10.  CAPweb: a bioinformatics CGH array Analysis Platform.

Authors:  Stéphane Liva; Philippe Hupé; Pierre Neuvial; Isabel Brito; Eric Viara; Philippe La Rosa; Emmanuel Barillot
Journal:  Nucleic Acids Res       Date:  2006-07-01       Impact factor: 16.971

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  6 in total

1.  Relationships between PTEN gene mutations and prognosis in glioma: a meta-analysis.

Authors:  Wei-Zhong Xiao; Dong-Hua Han; Fei Wang; Yong-Qian Wang; You-Hou Zhu; Yi-Fang Wu; Ning-Tao Liu; Ji-Yong Sun
Journal:  Tumour Biol       Date:  2014-04-08

2.  Molecular classification of anaplastic oligodendroglioma using next-generation sequencing: a report of the prospective randomized EORTC Brain Tumor Group 26951 phase III trial.

Authors:  Hendrikus J Dubbink; Peggy N Atmodimedjo; Johan M Kros; Pim J French; Marc Sanson; Ahmed Idbaih; Pieter Wesseling; Roelien Enting; Wim Spliet; Cees Tijssen; Winand N M Dinjens; Thierry Gorlia; Martin J van den Bent
Journal:  Neuro Oncol       Date:  2015-09-09       Impact factor: 12.300

3.  Something old and something new about molecular diagnostics in gliomas.

Authors:  Craig Horbinski
Journal:  Surg Pathol Clin       Date:  2012-12-01

4.  Intrinsic molecular subtypes of glioma are prognostic and predict benefit from adjuvant procarbazine, lomustine, and vincristine chemotherapy in combination with other prognostic factors in anaplastic oligodendroglial brain tumors: a report from EORTC study 26951.

Authors:  Lale Erdem-Eraslan; Lonneke A Gravendeel; Johan de Rooi; Paul H C Eilers; Ahmed Idbaih; Wim G M Spliet; Wilfred F A den Dunnen; Johannes L Teepen; Pieter Wesseling; Peter A E Sillevis Smitt; Johan M Kros; Thierry Gorlia; Martin J van den Bent; Pim J French
Journal:  J Clin Oncol       Date:  2012-12-26       Impact factor: 44.544

5.  A low-frequency variant at 8q24.21 is strongly associated with risk of oligodendroglial tumors and astrocytomas with IDH1 or IDH2 mutation.

Authors:  Robert B Jenkins; Yuanyuan Xiao; Hugues Sicotte; Paul A Decker; Thomas M Kollmeyer; Helen M Hansen; Matthew L Kosel; Shichun Zheng; Kyle M Walsh; Terri Rice; Paige Bracci; Lucie S McCoy; Ivan Smirnov; Joseph S Patoka; George Hsuang; Joe L Wiemels; Tarik Tihan; Alexander R Pico; Michael D Prados; Susan M Chang; Mitchel S Berger; Alissa A Caron; Stephanie R Fink; Chandralekha Halder; Amanda L Rynearson; Brooke L Fridley; Jan C Buckner; Brian P O'Neill; Caterina Giannini; Daniel H Lachance; John K Wiencke; Jeanette E Eckel-Passow; Margaret R Wrensch
Journal:  Nat Genet       Date:  2012-08-26       Impact factor: 41.307

6.  Synergistic antitumor effect between gefitinib and fractionated irradiation in anaplastic oligodendrogliomas cannot be predicted by the Egfr signaling activity.

Authors:  Sophie Pinel; Jihane Mriouah; Marc Vandamme; Alicia Chateau; François Plénat; Eric Guérin; Luc Taillandier; Valérie Bernier-Chastagner; Jean-Louis Merlin; Pascal Chastagner
Journal:  PLoS One       Date:  2013-07-18       Impact factor: 3.240

  6 in total

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