Literature DB >> 20816223

High-throughput RNAi screening for N-glycosylation dependent loci in Caenorhabditis elegans.

Weston B Struwe1, Charles E Warren.   

Abstract

The attachment of oligosaccharides to the amide nitrogen of asparagine side chains on proteins is a fundamental process occurring in all metazoans. This process, known as N-glycosylation, is complex and is achieved by the precise interactions of various cellular components. The initial stage of N-glycan biosynthesis is preserved among eukaryotes, and defective enzymes or components in this pathway cause congenital disorders of glycosylation type I (CDG-I) in humans. This disease is rare but exceedingly life-threatening with no known cure. Paramount to CDG treatment and care is understanding the mechanisms of N-glycosylation and factors that influence the pathology of the disease, both of which are not completely known. Here we outline a novel technique to model a CDG-I-like condition and identify genes that are vital for healthy glycosylation in Caenorhabditis elegans. C. elegans is a well-established model for understanding the complexity of glycosylation in development and disease. Although C. elegans N-glycan structures are dissimilar to that observed in higher eukaryotes, they contain over 150 gene homologs that are directly involved in glycosylation. Moreover, the annotated genome of C. elegans, its susceptibility to genetic silencing and its recognizable phenotypes, is a suitable model to dissect the complex phenomenon of glycosylation and identify genes that are required for N-glycan biosynthesis. Copyright (c) 2010 Elsevier Inc. All rights reserved.

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Year:  2010        PMID: 20816223     DOI: 10.1016/S0076-6879(10)80021-7

Source DB:  PubMed          Journal:  Methods Enzymol        ISSN: 0076-6879            Impact factor:   1.600


  7 in total

1.  UDP-N-acetylglucosamine-dolichyl-phosphate N-acetylglucosaminephosphotransferase is indispensable for oogenesis, oocyte-to-embryo transition, and larval development of the nematode Caenorhabditis elegans.

Authors:  Nanako Kanaki; Ayako Matsuda; Katsufumi Dejima; Daisuke Murata; Kazuko H Nomura; Takashi Ohkura; Keiko Gengyo-Ando; Sawako Yoshina; Shohei Mitani; Kazuya Nomura
Journal:  Glycobiology       Date:  2019-02-01       Impact factor: 4.313

2.  A novel GDP-D-glucose phosphorylase involved in quality control of the nucleoside diphosphate sugar pool in Caenorhabditis elegans and mammals.

Authors:  Lital N Adler; Tara A Gomez; Steven G Clarke; Carole L Linster
Journal:  J Biol Chem       Date:  2011-04-20       Impact factor: 5.157

3.  RNAi screening of human glycogene orthologs in the nematode Caenorhabditis elegans and the construction of the C. elegans glycogene database.

Authors:  Sayaka Akiyoshi; Kazuko H Nomura; Katsufumi Dejima; Daisuke Murata; Ayako Matsuda; Nanako Kanaki; Tetsuro Takaki; Hiroyuki Mihara; Takayuki Nagaishi; Shuhei Furukawa; Keiko-Gengyo Ando; Sawako Yoshina; Shohei Mitani; Akira Togayachi; Yoshinori Suzuki; Toshihide Shikanai; Hisashi Narimatsu; Kazuya Nomura
Journal:  Glycobiology       Date:  2014-08-04       Impact factor: 4.313

Review 4.  Therapies and therapeutic approaches in Congenital Disorders of Glycosylation.

Authors:  Christian Thiel; Christian Körner
Journal:  Glycoconj J       Date:  2012-09-16       Impact factor: 2.916

5.  The siRNA-mediated silencing of Trichinella spiralis nudix hydrolase results in reduction of larval infectivity.

Authors:  Zhong Quan Wang; Shuai Bing Zhang; Peng Jiang; Ruo Dan Liu; Shao Rong Long; Xi Zhang; Hui Jun Ren; Jing Cui
Journal:  Parasitol Res       Date:  2015-08-02       Impact factor: 2.289

6.  The Power Decoder Simulator for the Evaluation of Pooled shRNA Screen Performance.

Authors:  Jesse Stombaugh; Abel Licon; Žaklina Strezoska; Joshua Stahl; Sarah Bael Anderson; Michael Banos; Anja van Brabant Smith; Amanda Birmingham; Annaleen Vermeulen
Journal:  J Biomol Screen       Date:  2015-03-16

7.  RNAi-mediated silencing of paramyosin expression in Trichinella spiralis results in impaired viability of the parasite.

Authors:  Xiaoqin Chen; Yaping Yang; Jing Yang; Zhifei Zhang; Xinping Zhu
Journal:  PLoS One       Date:  2012-11-21       Impact factor: 3.240

  7 in total

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