Literature DB >> 20813133

Development of a loop-mediated isothermal amplification assay for rapid and sensitive detection of ostreid herpesvirus 1 DNA.

Weicheng Ren1, Tristan Renault, Yuyong Cai, Chongming Wang.   

Abstract

A loop-mediated isothermal amplification (LAMP) assay was developed for rapid, specific and sensitive detection of ostreid herpesvirus 1 (OsHV-1) DNA. A set of four primers was designed, based on the sequence of the ATPase subunit of the OsHV-1 DNA-packaging terminase gene. The reaction temperature and time were optimized to 64°C and 60min, respectively. LAMP products were detected by agarose gel electrophoresis or by visual inspection of a color change due to addition of fluorescent dye. The developed method was highly specific for detection of OsHV-1, and no cross-reaction was observed with other DNA viruses, such as White spot syndrome virus (WSSV), Penaeus stylirostris densovirus (PstDNV), Turbot reddish body iridovirus (TRBIV) and Lymphocystis disease virus (LCDV) found commonly in China. The lower detection limit of the LAMP assay was approximately 20 copies per reaction, and it was 100 times more sensitive than that of conventional PCR. A comparative evaluation of 10 oyster samples using LAMP and PCR assays showed overall correlation in positive and negative results for OsHV-1. These results indicate that the LAMP assay is a simple, rapid, sensitive, specific and reliable technique for the detection of OsHV-1. The LAMP technique has capacity for use for the detection of OsHV-1 both in the laboratory and on farms. Crown
Copyright © 2010. Published by Elsevier B.V. All rights reserved.

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Year:  2010        PMID: 20813133     DOI: 10.1016/j.jviromet.2010.08.015

Source DB:  PubMed          Journal:  J Virol Methods        ISSN: 0166-0934            Impact factor:   2.014


  4 in total

Review 1.  Colorimetric biosensors for point-of-care virus detections.

Authors:  Victoria Xin Ting Zhao; Ten It Wong; Xin Ting Zheng; Yen Nee Tan; Xiaodong Zhou
Journal:  Mater Sci Energy Technol       Date:  2019-10-23

2.  A loop-mediated isothermal amplification assay for rapid detection of cyprinid herpesvirus 2 in gibel carp (Carassius auratus gibelio).

Authors:  Hui Zhang; Lingbing Zeng; Yuding Fan; Yong Zhou; Jin Xu; Jie Ma
Journal:  ScientificWorldJournal       Date:  2014-01-19

3.  Visual Detection of Enterohemorrhagic Escherichia coli O157:H7 Using Loop-Mediated Isothermal Amplification.

Authors:  Reza Ranjbar; Maryam Erfanmanesh; Davoud Afshar; Mohsen Mohammadi; Omar Ghaderi; Ali Haghnazari
Journal:  Electron Physician       Date:  2016-06-25

4.  A Single-Tube HNB-Based Loop-Mediated Isothermal Amplification for the Robust Detection of the Ostreid herpesvirus 1.

Authors:  Maja A Zaczek-Moczydłowska; Letitia Mohamed-Smith; Anna Toldrà; Chantelle Hooper; Mònica Campàs; M Dolors Furones; Tim P Bean; Katrina Campbell
Journal:  Int J Mol Sci       Date:  2020-09-09       Impact factor: 5.923

  4 in total

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