Literature DB >> 20811381

Emerging principles in protease-based drug discovery.

Marcin Drag1, Guy S Salvesen.   

Abstract

Proteases have an important role in many signalling pathways, and represent potential drug targets for diseases ranging from cardiovascular disorders to cancer, as well as for combating many parasites and viruses. Although inhibitors of well-established protease targets such as angiotensin-converting enzyme and HIV protease have shown substantial therapeutic success, developing drugs for new protease targets has proved challenging in recent years. This in part could be due to issues such as the difficulty of achieving selectivity when targeting protease active sites. This Perspective discusses the general principles in protease-based drug discovery, highlighting the lessons learned and the emerging strategies, such as targeting allosteric sites, which could help harness the therapeutic potential of new protease targets.

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Year:  2010        PMID: 20811381      PMCID: PMC2974563          DOI: 10.1038/nrd3053

Source DB:  PubMed          Journal:  Nat Rev Drug Discov        ISSN: 1474-1776            Impact factor:   84.694


  128 in total

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Review 2.  Matrix metalloproteinase inhibitors as therapy for inflammatory and vascular diseases.

Authors:  Jialiang Hu; Philippe E Van den Steen; Qing-Xiang A Sang; Ghislain Opdenakker
Journal:  Nat Rev Drug Discov       Date:  2007-06       Impact factor: 84.694

Review 3.  Basic mechanisms in blood coagulation.

Authors:  E W Davie; K Fujikawa
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Review 4.  Caspase substrates.

Authors:  J C Timmer; G S Salvesen
Journal:  Cell Death Differ       Date:  2006-11-03       Impact factor: 15.828

5.  Antibodies neutralizing hepsin protease activity do not impact cell growth but inhibit invasion of prostate and ovarian tumor cells in culture.

Authors:  Jian-Ai Xuan; Doug Schneider; Pam Toy; Rick Lin; Alicia Newton; Ying Zhu; Silke Finster; David Vogel; Bob Mintzer; Harald Dinter; David Light; Renate Parry; Mark Polokoff; Marc Whitlow; Qingyu Wu; Gordon Parry
Journal:  Cancer Res       Date:  2006-04-01       Impact factor: 12.701

6.  Structural and kinetic determinants of protease substrates.

Authors:  John C Timmer; Wenhong Zhu; Cristina Pop; Tim Regan; Scott J Snipas; Alexey M Eroshkin; Stefan J Riedl; Guy S Salvesen
Journal:  Nat Struct Mol Biol       Date:  2009-09-20       Impact factor: 15.369

7.  MMP-20 is predominately a tooth-specific enzyme with a deep catalytic pocket that hydrolyzes type V collagen.

Authors:  Benjamin E Turk; Daniel H Lee; Yasuo Yamakoshi; Andreas Klingenhoff; Ernst Reichenberger; J Timothy Wright; James P Simmer; Justin A Komisarof; Lewis C Cantley; John D Bartlett
Journal:  Biochemistry       Date:  2006-03-28       Impact factor: 3.162

8.  Small molecule-induced allosteric activation of the Vibrio cholerae RTX cysteine protease domain.

Authors:  Patrick J Lupardus; Aimee Shen; Matthew Bogyo; K Christopher Garcia
Journal:  Science       Date:  2008-10-10       Impact factor: 47.728

9.  The structure of a complex of recombinant hirudin and human alpha-thrombin.

Authors:  T J Rydel; K G Ravichandran; A Tulinsky; W Bode; R Huber; C Roitsch; J W Fenton
Journal:  Science       Date:  1990-07-20       Impact factor: 47.728

Review 10.  Role of Factor XII in hemostasis and thrombosis: clinical implications.

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Journal:  Expert Rev Cardiovasc Ther       Date:  2007-07
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  186 in total

1.  Pre-steady-state kinetics of interaction of wild-type and multiple drug-resistant HIV protease with first and second generation inhibitory drugs.

Authors:  N A Kuznetsov; A V Kozyr; M A Dronina; I V Smirnov; E N Kaliberda; A G Mikhailova; L D Rumsh; O S Fedorova; A G Gabibov; A V Kolesnikov
Journal:  Dokl Biochem Biophys       Date:  2011-11-19       Impact factor: 0.788

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Journal:  EMBO J       Date:  2012-02-24       Impact factor: 11.598

3.  Targeting zymogen activation to control the matriptase-prostasin proteolytic cascade.

Authors:  Zhenghong Xu; Ya-Wen Chen; Aruna Battu; Paul Wilder; David Weber; Wenbo Yu; Alexander D Mackerell; Li-Mei Chen; Karl X Chai; Michael D Johnson; Chen-Yong Lin
Journal:  J Med Chem       Date:  2011-10-12       Impact factor: 7.446

4.  Mechanism and specificity of the human paracaspase MALT1.

Authors:  Janna Hachmann; Scott J Snipas; Bram J van Raam; Erik M Cancino; Emily J Houlihan; Marcin Poreba; Paulina Kasperkiewicz; Marcin Drag; Guy S Salvesen
Journal:  Biochem J       Date:  2012-04-01       Impact factor: 3.857

5.  On the cutting edge of proprotein convertase pharmacology: from molecular concepts to clinical applications.

Authors:  Frédéric Couture; François D'Anjou; Robert Day
Journal:  Biomol Concepts       Date:  2011-10-01

6.  Generation of Highly Selective MMP Antibody Inhibitors.

Authors:  Dong Hyun Nam; Xin Ge
Journal:  Methods Mol Biol       Date:  2018

7.  The different ways through which specificity works in orthosteric and allosteric drugs.

Authors:  Ruth Nussinov; Chung-Jung Tsai
Journal:  Curr Pharm Des       Date:  2012       Impact factor: 3.116

8.  Examination of mechanism of N-acetyl-1-D-myo-inosityl-2-amino-2-deoxy-α-D-glucopyranoside deacetylase (MshB) reveals unexpected role for dynamic tyrosine.

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Journal:  J Biol Chem       Date:  2012-02-07       Impact factor: 5.157

Review 9.  Recent advances in the discovery and development of factor XI/XIa inhibitors.

Authors:  Rami A Al-Horani; Daniel K Afosah
Journal:  Med Res Rev       Date:  2018-05-04       Impact factor: 12.944

10.  Engineering of TEV protease variants by yeast ER sequestration screening (YESS) of combinatorial libraries.

Authors:  Li Yi; Mark C Gebhard; Qing Li; Joseph M Taft; George Georgiou; Brent L Iverson
Journal:  Proc Natl Acad Sci U S A       Date:  2013-04-15       Impact factor: 11.205

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