Literature DB >> 20810694

Unsupervised classification of high-frequency oscillations in human neocortical epilepsy and control patients.

Justin A Blanco1, Matt Stead, Abba Krieger, Jonathan Viventi, W Richard Marsh, Kendall H Lee, Gregory A Worrell, Brian Litt.   

Abstract

High-frequency oscillations (HFOs) have been observed in animal and human intracranial recordings during both normal and aberrant brain states. It has been proposed that the relationship between subclasses of these oscillations can be used to identify epileptic brain. Studies of HFOs in epilepsy have been hampered by selection bias arising primarily out of the need to reduce the volume of data so that clinicians can manually review it. In this study, we introduce an algorithm for detecting and classifying these signals automatically and demonstrate the tractability of analyzing a data set of unprecedented size, over 31,000 channel-hours of intracranial electroencephalographic (iEEG) recordings from micro- and macroelectrodes in humans. Using an unsupervised approach that does not presuppose a specific number of clusters in the data, we show direct evidence for the existence of distinct classes of transient oscillations within the 100- to 500-Hz frequency range in a population of nine neocortical epilepsy patients and two controls. The number of classes we find, four (three plus one putative artifact class), is consistent with prior studies that identify "ripple" and "fast ripple" oscillations using human-intensive methods and, additionally, identifies a less examined class of mixed-frequency events.

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Year:  2010        PMID: 20810694      PMCID: PMC2997042          DOI: 10.1152/jn.01082.2009

Source DB:  PubMed          Journal:  J Neurophysiol        ISSN: 0022-3077            Impact factor:   2.714


  17 in total

1.  Fast network oscillations in the hippocampal CA1 region of the behaving rat.

Authors:  J Csicsvari; H Hirase; A Czurkó; A Mamiya; G Buzsáki
Journal:  J Neurosci       Date:  1999-08-15       Impact factor: 6.167

2.  High-frequency oscillations during human focal seizures.

Authors:  J D Jirsch; E Urrestarazu; P LeVan; A Olivier; F Dubeau; J Gotman
Journal:  Brain       Date:  2006-04-21       Impact factor: 13.501

3.  Effect of sleep stage on interictal high-frequency oscillations recorded from depth macroelectrodes in patients with focal epilepsy.

Authors:  Andrew P Bagshaw; Julia Jacobs; Pierre LeVan; François Dubeau; Jean Gotman
Journal:  Epilepsia       Date:  2009-04       Impact factor: 5.864

4.  Detection of seizure-associated high-frequency oscillations above 500Hz.

Authors:  Katsuhiro Kobayashi; Takashi Agari; Makio Oka; Harumi Yoshinaga; Isao Date; Yoko Ohtsuka; Jean Gotman
Journal:  Epilepsy Res       Date:  2009-11-14       Impact factor: 3.045

5.  Human and automated detection of high-frequency oscillations in clinical intracranial EEG recordings.

Authors:  Andrew B Gardner; Greg A Worrell; Eric Marsh; Dennis Dlugos; Brian Litt
Journal:  Clin Neurophysiol       Date:  2007-03-23       Impact factor: 3.708

Review 6.  High-frequency oscillations: what is normal and what is not?

Authors:  Jerome Engel; Anatol Bragin; Richard Staba; Istvan Mody
Journal:  Epilepsia       Date:  2008-12-04       Impact factor: 5.864

7.  High frequency oscillations (80-500 Hz) in the preictal period in patients with focal seizures.

Authors:  Julia Jacobs; Rina Zelmann; Jeffrey Jirsch; Rahul Chander; Claude-Edouard Châtillon François Dubeau; Jean Gotman
Journal:  Epilepsia       Date:  2009-03-27       Impact factor: 5.864

8.  Large-scale electrophysiology: acquisition, compression, encryption, and storage of big data.

Authors:  Benjamin H Brinkmann; Mark R Bower; Keith A Stengel; Gregory A Worrell; Matt Stead
Journal:  J Neurosci Methods       Date:  2009-04-01       Impact factor: 2.390

9.  Phase I trial: safety and feasibility of intracranial electroencephalography using hybrid subdural electrodes containing macro- and microelectrode arrays.

Authors:  Jamie J Van Gompel; S Matthew Stead; Caterina Giannini; Fredric B Meyer; W Richard Marsh; Todd Fountain; Elson So; Aaron Cohen-Gadol; Kendall H Lee; Gregory A Worrell
Journal:  Neurosurg Focus       Date:  2008-09       Impact factor: 4.047

10.  High-frequency oscillations in human temporal lobe: simultaneous microwire and clinical macroelectrode recordings.

Authors:  Greg A Worrell; Andrew B Gardner; S Matt Stead; Sanqing Hu; Steve Goerss; Gregory J Cascino; Fredric B Meyer; Richard Marsh; Brian Litt
Journal:  Brain       Date:  2008-02-07       Impact factor: 13.501

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  50 in total

1.  Interictal scalp fast oscillations as a marker of the seizure onset zone.

Authors:  Daniel M Goldenholz; Masud Seyal; Lisa M Bateman; Jean Gotman; Luciana Andrade-Valenca; Rina Zelmann; Francois Dubeau
Journal:  Neurology       Date:  2012-01-17       Impact factor: 9.910

2.  Emergent dynamics of fast ripples in the epileptic hippocampus.

Authors:  Jose M Ibarz; Guglielmo Foffani; Elena Cid; Marion Inostroza; Liset Menendez de la Prida
Journal:  J Neurosci       Date:  2010-12-01       Impact factor: 6.167

Review 3.  High-frequency oscillations and other electrophysiological biomarkers of epilepsy: clinical studies.

Authors:  Greg Worrell; Jean Gotman
Journal:  Biomark Med       Date:  2011-10       Impact factor: 2.851

4.  Sensing the body electric: biomarkers of epileptic brain.

Authors:  Gregory A Worrell
Journal:  Epilepsy Curr       Date:  2011-07       Impact factor: 7.500

5.  A comparison between detectors of high frequency oscillations.

Authors:  R Zelmann; F Mari; J Jacobs; M Zijlmans; F Dubeau; J Gotman
Journal:  Clin Neurophysiol       Date:  2011-07-16       Impact factor: 3.708

Review 6.  Hippocampal sharp wave-ripple: A cognitive biomarker for episodic memory and planning.

Authors:  György Buzsáki
Journal:  Hippocampus       Date:  2015-10       Impact factor: 3.899

Review 7.  Recording and analysis techniques for high-frequency oscillations.

Authors:  G A Worrell; K Jerbi; K Kobayashi; J M Lina; R Zelmann; M Le Van Quyen
Journal:  Prog Neurobiol       Date:  2012-03-07       Impact factor: 11.685

Review 8.  Conundrums of high-frequency oscillations (80-800 Hz) in the epileptic brain.

Authors:  Liset Menendez de la Prida; Richard J Staba; Joshua A Dian
Journal:  J Clin Neurophysiol       Date:  2015-06       Impact factor: 2.177

Review 9.  Toward new paradigms of seizure detection.

Authors:  Devin K Binder; Sheryl R Haut
Journal:  Epilepsy Behav       Date:  2012-12-12       Impact factor: 2.937

10.  A low-cost, multiplexed μECoG system for high-density recordings in freely moving rodents.

Authors:  Michele Insanally; Michael Trumpis; Charles Wang; Chia-Han Chiang; Virginia Woods; Kay Palopoli-Trojani; Silvia Bossi; Robert C Froemke; Jonathan Viventi
Journal:  J Neural Eng       Date:  2016-03-15       Impact factor: 5.379

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